Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30406.Seq
(864 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 31 0.045
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 26 1.3
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 3.0
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 25 3.0
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 25 3.0
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 24 5.2
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 5.2
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 23 9.1
AJ000502-1|CAA04136.1| 299|Anopheles gambiae iron regulatory pr... 23 9.1
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 23 9.1
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 31.1 bits (67), Expect = 0.045
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 320 RQRSILL*PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGD 499
R+R L R ++R Q Q++ Q+ Q+Q +Q+ Q+ Q+QP + + P
Sbjct: 173 RKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQ 232
Query: 500 QRWS 511
Q W+
Sbjct: 233 QLWT 236
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 26.2 bits (55), Expect = 1.3
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 395 QKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPD 556
Q+++ R Q +RQ+ Q+ Q QP V+ Q+ H ++ R P+
Sbjct: 333 QQQTGRYQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQQQQHQQQQQKRKRPKPE 386
Score = 24.2 bits (50), Expect = 5.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 392 HQKRSQRAQKQ*LRQRTDQRIHQEQ 466
HQ+R Q+ Q+Q +Q+ Q+ Q+Q
Sbjct: 229 HQQREQQQQQQQQQQQQQQQQQQQQ 253
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 368 PLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQ 466
P + L HQ+ +Q++ +Q +Q+ Q + Q+Q
Sbjct: 223 PSPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQ 255
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 25.0 bits (52), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 340 LATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
LAT V A + + AS A S C +++TT++ D T S
Sbjct: 15 LATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGRTFCS 59
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 25.0 bits (52), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 340 LATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
LAT V A + + AS A S C +++TT++ D T S
Sbjct: 15 LATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGRTFCS 59
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 24.2 bits (50), Expect = 5.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 317 GRQRSILL*PRTKDRSGPLGQLLSGHQKRSQRAQK 421
GR+R + + KD S P+G + G Q+ ++ +K
Sbjct: 54 GRRRGRMGGKQPKDYSAPIGFIAGGIQQSGKKPEK 88
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 24.2 bits (50), Expect = 5.2
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 730 PGILETXGRRKXXLREGIPGRIGXPNLKXXXXRFXTRKFPGEKG 861
PG+ G + R G+PG G LK T PG KG
Sbjct: 546 PGLPGRDGEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKG 589
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 23.4 bits (48), Expect = 9.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 150 SVHFVNDLCSRHNYKLHLIHIDANY 76
S H ++D +R+ +LHL+H D Y
Sbjct: 120 SEHTLDD--TRYGLELHLVHHDTRY 142
>AJ000502-1|CAA04136.1| 299|Anopheles gambiae iron regulatory
protein protein.
Length = 299
Score = 23.4 bits (48), Expect = 9.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 473 ARTVSDPGDQRWSVHASPARELSRDTP 553
AR + + GD + H SPA ++R++P
Sbjct: 75 ARALLNLGDSVTTDHISPAGSIARNSP 101
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 23.4 bits (48), Expect = 9.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 421 AITTSTNRSEDTSGTAMSQNCLRSGRPTVERP 516
A+ + + S DTS T++ + SG PT+ P
Sbjct: 4 ALGLTRSMSADTSKTSVGKQLPASGIPTLRAP 35
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 920,461
Number of Sequences: 2352
Number of extensions: 19443
Number of successful extensions: 55
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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