Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30406.Seq
         (864 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1...    32   2.3  
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1...    32   2.3  
L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.                  30   9.5  

>Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1
           protein.
          Length = 1324

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +3

Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHV-PKIGPGHLDN--SSVGIRSALNVP 416
           FKC +CG + + K      H+   KE Y    + P   P HLDN  +S GI   +++P
Sbjct: 477 FKCNICGNRFSTKGNL-KVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIP 533


>Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1
           protein.
          Length = 1324

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +3

Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHV-PKIGPGHLDN--SSVGIRSALNVP 416
           FKC +CG + + K      H+   KE Y    + P   P HLDN  +S GI   +++P
Sbjct: 477 FKCNICGNRFSTKGNL-KVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIP 533


>L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.
          Length = 505

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 444 IRGYIRNSHEPELSPIRATNGGASTRLQQGSYRVIPLTTSTGDSTPAPST*HT 602
           +  +  ++H PE++P   TN    +  +  S  V   T++T    P P T H+
Sbjct: 244 LHSHASSTHHPEVTPTSTTNVTPKSTSRDTSTPVTHTTSATSSRPPTPITTHS 296


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,037,145
Number of Sequences: 237096
Number of extensions: 2927504
Number of successful extensions: 7488
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7480
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)