Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30405.Seq
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M73031-1|AAA58630.1| 108|Homo sapiens coupling factor 6 protein. 38 0.015
M37104-1|AAA51807.1| 108|Homo sapiens ATPase coupling factor 6 ... 38 0.015
CR456950-1|CAG33231.1| 108|Homo sapiens ATP5J protein. 38 0.015
BT007244-1|AAP35908.1| 108|Homo sapiens ATP synthase, H+ transp... 38 0.015
BC066310-1|AAH66310.1| 108|Homo sapiens ATP synthase, H+ transp... 38 0.015
BC001178-1|AAH01178.1| 108|Homo sapiens ATP synthase, H+ transp... 38 0.015
AY544129-1|AAT11160.1| 108|Homo sapiens proliferation-inducing ... 38 0.015
>M73031-1|AAA58630.1| 108|Homo sapiens coupling factor 6 protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 DMTAFPSLKFEEPKLDPIDEQAA 109
DM FP+ KFE+PK + I++ A
Sbjct: 86 DMNTFPTFKFEDPKFEVIEKPQA 108
>M37104-1|AAA51807.1| 108|Homo sapiens ATPase coupling factor 6
subunit protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 DMTAFPSLKFEEPKLDPIDEQAA 109
DM FP+ KFE+PK + I++ A
Sbjct: 86 DMNTFPTFKFEDPKFEVIEKPQA 108
>CR456950-1|CAG33231.1| 108|Homo sapiens ATP5J protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 DMTAFPSLKFEEPKLDPIDEQAA 109
DM FP+ KFE+PK + I++ A
Sbjct: 86 DMNTFPTFKFEDPKFEVIEKPQA 108
>BT007244-1|AAP35908.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 DMTAFPSLKFEEPKLDPIDEQAA 109
DM FP+ KFE+PK + I++ A
Sbjct: 86 DMNTFPTFKFEDPKFEVIEKPQA 108
>BC066310-1|AAH66310.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
>BC001178-1|AAH01178.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 DMTAFPSLKFEEPKLDPIDEQAA 109
DM FP+ KFE+PK + I++ A
Sbjct: 86 DMNTFPTFKFEDPKFEVIEKPQA 108
>AY544129-1|AAT11160.1| 108|Homo sapiens proliferation-inducing
protein 36 protein.
Length = 108
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -2
Query: 347 AAQKATDPIQQLFLDKIREYKQK--SAGGKV 261
A K DPIQ+LF+DKIREYK K ++GG V
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV 61
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 DMTAFPSLKFEEPKLDPIDEQAA 109
DM FP+ KFE+PK + I++ A
Sbjct: 86 DMNTFPTFKFEDPKFEVIEKPQA 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,442,029
Number of Sequences: 237096
Number of extensions: 1365698
Number of successful extensions: 1726
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1726
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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