Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30404.Seq
(884 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 155 6e-38
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 155 6e-38
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 155 6e-38
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 155 6e-38
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 153 4e-37
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 32 1.2
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 155 bits (377), Expect = 6e-38
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 202 ARVRKNTEARRKGRHCG 252
RVRKNTEARRKGRHCG
Sbjct: 66 YRVRKNTEARRKGRHCG 82
Score = 128 bits (308), Expect = 1e-29
Identities = 63/96 (65%), Positives = 68/96 (70%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG GKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 77 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 136
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*R 521
FKNKRVLMEYIH+KKAEK R+KML+DQAEARR K R
Sbjct: 137 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 172
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 155 bits (377), Expect = 6e-38
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 202 ARVRKNTEARRKGRHCG 252
RVRKNTEARRKGRHCG
Sbjct: 79 YRVRKNTEARRKGRHCG 95
Score = 128 bits (308), Expect = 1e-29
Identities = 63/96 (65%), Positives = 68/96 (70%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG GKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 90 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 149
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*R 521
FKNKRVLMEYIH+KKAEK R+KML+DQAEARR K R
Sbjct: 150 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 185
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 155 bits (377), Expect = 6e-38
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
RVRKNTEARRKGRHCG
Sbjct: 61 YRVRKNTEARRKGRHCG 77
Score = 128 bits (308), Expect = 1e-29
Identities = 63/96 (65%), Positives = 68/96 (70%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG GKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 131
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*R 521
FKNKRVLMEYIH+KKAEK R+KML+DQAEARR K R
Sbjct: 132 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 167
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 155 bits (377), Expect = 6e-38
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
RVRKNTEARRKGRHCG
Sbjct: 61 YRVRKNTEARRKGRHCG 77
Score = 128 bits (308), Expect = 1e-29
Identities = 63/96 (65%), Positives = 68/96 (70%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG GKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 131
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*R 521
FKNKRVLMEYIH+KKAEK R+KML+DQAEARR K R
Sbjct: 132 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 167
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 153 bits (370), Expect = 4e-37
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
RVRKNTEARRK RHCG
Sbjct: 61 YRVRKNTEARRKDRHCG 77
Score = 125 bits (302), Expect = 7e-29
Identities = 61/89 (68%), Positives = 66/89 (74%)
Frame = +3
Query: 255 GKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVL 434
GKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVL
Sbjct: 79 GKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVL 138
Query: 435 MEYIHRKKAEKARTKMLSDQAEARRIK*R 521
MEYIH+KKAEK R+KML+DQAEARR K R
Sbjct: 139 MEYIHKKKAEKQRSKMLADQAEARRQKVR 167
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -2
Query: 442 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 269
YS++ +L L +YR FL +++ NF TLC C +S FCG A V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,597,929
Number of Sequences: 53049
Number of extensions: 861871
Number of successful extensions: 2196
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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