Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30402.Seq
(709 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 64 3e-09
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 64 4e-09
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 64 4e-09
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 59 1e-07
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 56 6e-07
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 54 3e-06
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 54 3e-06
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 51 3e-05
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 48 2e-04
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 48 2e-04
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 48 3e-04
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 46 0.001
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 46 0.001
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 45 0.002
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 44 0.004
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 43 0.009
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 42 0.015
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 40 0.060
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 39 0.10
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 38 0.18
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 38 0.32
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 37 0.56
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 36 0.74
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 35 2.3
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 33 6.9
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/47 (59%), Positives = 40/47 (85%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
V+ +L SVGIEAD+++L K+I+EL GKD+ +LIA+G EKL+S+P GG
Sbjct: 23 VKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGG 69
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/48 (54%), Positives = 43/48 (89%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
++KIL+SVG EAD ++++ ++++++GKD+ +LIAAGREKL+S+P GGG
Sbjct: 23 LKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGREKLASVPAGGG 70
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P GG
Sbjct: 23 IKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAGG 69
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P GG
Sbjct: 23 IKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/47 (51%), Positives = 38/47 (80%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
++ +LSSVGI+AD E+L ++ EL GKD+ +LI++G +KL+S+P GG
Sbjct: 23 IKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQKLASVPSGG 69
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/48 (45%), Positives = 38/48 (79%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
++ I+ +VG + D E ++ ++ E++GKD+ +LIA+GREKL+S+P GGG
Sbjct: 23 IKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG 70
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
++ IL SVGI+AD EKL KVI EL GKD+ ++IAA KL+S+P GG
Sbjct: 23 IKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAAD-AKLASVPSGG 68
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
++KIL VG+EA + L KVI+ELNGK++E +IA G +L+S+P GG
Sbjct: 11 IKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
V+K+L++ I+AD E+L +I EL GKDV ++IA G +KL+S+P GG
Sbjct: 23 VKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSGG 69
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
++ IL SVGIE + EK+ V++ L GK V++LI G EKL+++P G
Sbjct: 22 IKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAG 68
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/48 (41%), Positives = 33/48 (68%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
V+K+L SVG++++ +KL ++ L GK + +LI AG K+SS+ G G
Sbjct: 23 VKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSKVSSLSAGAG 70
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3
Query: 411 EDFXKXHXGTKWKANPFGGAXHAKGIVXXKXGXKLSXP 524
+ + K H GT KANPFGGA HAKGIV K G + P
Sbjct: 25 KQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQP 62
Score = 39.9 bits (89), Expect = 0.060
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +1
Query: 559 LKNGXKVXAFXPRXGCLNPXXKTPXY*WRXFGPKGXXVGXIXGFVFR 699
+KNG K+ AF P GCLN + FG KG VG I G F+
Sbjct: 75 IKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 138
V+KIL ++ I+AD E+LK VI N K++E LI+ G KL SMP G
Sbjct: 20 VKKILGNINIKADEERLK-VIGNFNSKNIEDLISQGSNKLDSMPNG 64
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
V +L+SVG E D + L + ++GK V + I+AG +KL ++P GGG
Sbjct: 25 VRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLDKLQTLPAGGG 72
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
V K+L + G++ D E V+ L GK + ++IA G+ KLSS+P GG
Sbjct: 23 VLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSGG 69
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/48 (37%), Positives = 33/48 (68%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
+ K+L G+E+ A +K V++ L GK++ +I G+++L+S+ VGGG
Sbjct: 23 ITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQKQLTSLSVGGG 70
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPV 135
V++IL++ G E D K+K+V +NGK+V ++I AG++++ SM V
Sbjct: 22 VKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKKQMGSMAV 66
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
VEKIL S +E D ++ VI + GK E++IAAG EKL+ G
Sbjct: 23 VEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSEKLAKFGSAG 69
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/47 (38%), Positives = 34/47 (72%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
V+KIL + G+E DA +L+ V+T+++ K V++L+ G+ +++ VGG
Sbjct: 23 VKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKTEMNK--VGG 67
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 39.9 bits (89), Expect = 0.060
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 414 DFXKXHXGTKWKANPFGGAXHAKGIVXXKXGXKLSXP 524
++ K GT +K++PFGG+ HAKGIV K G + P
Sbjct: 28 NYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQP 64
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +1
Query: 559 LKNGXKVXAFXPRXGCLNPXXKTPXY*WRXFGPKGXXVGXIXGFVFR 699
+KNG KV AF P GCLN + FG KG G I G F+
Sbjct: 77 IKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Score = 35.9 bits (79), Expect = 0.98
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +2
Query: 455 PFRXXXSRKGHRPRXXWXXAKXPNSAIRKCVRVQLLRTEXK 577
PF KG +K PNSAIRKCVRVQL++ K
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKK 82
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSM 129
++KILSS+G EA+AE L KVI + N K+ E++I KL+SM
Sbjct: 23 LKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESSKLASM 64
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 38.3 bits (85), Expect = 0.18
Identities = 18/49 (36%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELN--GKDVEQLIAAGREKLSSMPVGG 141
+EKI+++VG DA+ K V+ ++ G VE L++ G+++++SMP G
Sbjct: 23 IEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLGKKRMASMPAVG 71
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 37.5 bits (83), Expect = 0.32
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 132
VE I +V I+ D L V+ + G+DV LIA G K+S+MP
Sbjct: 24 VEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKMSAMP 67
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 36.7 bits (81), Expect = 0.56
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREK 117
V++ILS+ G E D K+K+V +NGK+V ++I R K
Sbjct: 22 VKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELERNK 60
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 36.3 bits (80), Expect = 0.74
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLS 123
V IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 81 VRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLA 121
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 34.7 bits (76), Expect = 2.3
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 512 AKXPNSAIRKCVRVQLLR 565
AK PNSAIRKC+R+QL++
Sbjct: 57 AKQPNSAIRKCIRIQLIK 74
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 33.1 bits (72), Expect = 6.9
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 141
VE L ++ +E +AE +KKVI L GK+ E +GR++ SS+ G
Sbjct: 104 VESPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,277,572
Number of Sequences: 1657284
Number of extensions: 4996606
Number of successful extensions: 10382
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10368
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -