Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30402.Seq
(709 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 74 2e-13
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 74 2e-13
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 74 2e-13
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 74 2e-13
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 74 2e-13
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 57 3e-08
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 57 3e-08
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 6.2
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 23 LEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 23 LEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 23 LEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 23 LEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 144
+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 23 LEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 56.8 bits (131), Expect = 3e-08
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 411 EDFXKXHXGTKWKANPFGGAXHAKGIVXXKXGXKLSXP 524
+D+ K H GT+WKANPFGGA HAKGIV K G + P
Sbjct: 25 KDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQP 62
Score = 38.3 bits (85), Expect = 0.010
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +1
Query: 559 LKNGXKVXAFXPRXGCLNPXXKTPXY*WRXFGPKGXXVGXIXGFVFR 699
+KNG K+ AF PR G LN + FG KG VG I G F+
Sbjct: 75 IKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
Score = 37.1 bits (82), Expect = 0.023
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +2
Query: 455 PFRXXXSRKGHRPRXXWXXAKXPNSAIRKCVRVQLLRTEXK 577
PF KG AK PNSAIRKCVRVQL++ K
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 80
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 56.8 bits (131), Expect = 3e-08
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 411 EDFXKXHXGTKWKANPFGGAXHAKGIVXXKXGXKLSXP 524
+D+ K H GT+WKANPFGGA HAKGIV K G + P
Sbjct: 25 KDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQP 62
Score = 38.3 bits (85), Expect = 0.010
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +1
Query: 559 LKNGXKVXAFXPRXGCLNPXXKTPXY*WRXFGPKGXXVGXIXGFVFR 699
+KNG K+ AF PR G LN + FG KG VG I G F+
Sbjct: 75 IKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
Score = 37.1 bits (82), Expect = 0.023
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +2
Query: 455 PFRXXXSRKGHRPRXXWXXAKXPNSAIRKCVRVQLLRTEXK 577
PF KG AK PNSAIRKCVRVQL++ K
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 80
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 VEKILSSVGIEADAEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 141
V KIL G++ ++ +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,426,671
Number of Sequences: 53049
Number of extensions: 239961
Number of successful extensions: 363
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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