Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30401.Seq
         (594 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KBP3 Cluster: Transmission-blocking target antigen Pf...    34   2.2  
UniRef50_Q9YVJ3 Cluster: ORF MSV249 hypotehtical protein; n=1; M...    33   3.8  
UniRef50_A0DZS5 Cluster: Chromosome undetermined scaffold_70, wh...    32   8.8  

>UniRef50_A5KBP3 Cluster: Transmission-blocking target antigen Pfs230,
            putative; n=1; Plasmodium vivax|Rep:
            Transmission-blocking target antigen Pfs230, putative -
            Plasmodium vivax
          Length = 2748

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 121  CASTKLRVHTTINVYFQSIEPYKLSETKILEIV 219
            C S  L +H  IN+YF +++P K+   K+L  V
Sbjct: 995  CPSRDLSIHQNINLYFNTVKPTKVESPKVLNQV 1027


>UniRef50_Q9YVJ3 Cluster: ORF MSV249 hypotehtical protein; n=1;
           Melanoplus sanguinipes entomopoxvirus|Rep: ORF MSV249
           hypotehtical protein - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 63

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 18/31 (58%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 355 YSYILYV*NIHIFSKHIYMII-TSCRRYAFL 444
           Y YILYV N   F K IY+II TSC  Y  L
Sbjct: 24  YVYILYVKNSFFFEKIIYLIILTSCMLYCVL 54


>UniRef50_A0DZS5 Cluster: Chromosome undetermined scaffold_70, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_70, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2418

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 127  STKLRVHTTINVYFQSIEPYKLSETKILEIVCK 225
            S +L  H  + ++FQS +PY L ETK+ ++  K
Sbjct: 2118 SQQLGYHKKLKLFFQSFKPYTLLETKLNQLFAK 2150


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,794,479
Number of Sequences: 1657284
Number of extensions: 6397572
Number of successful extensions: 9360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9360
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)