Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30399.Seq
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105294-1|AAI05295.1|  125|Homo sapiens hypothetical protein HS...    71   5e-12
BC029482-1|AAH29482.1|  125|Homo sapiens hypothetical protein HS...    71   5e-12
BC017172-1|AAH17172.1|  125|Homo sapiens hypothetical protein HS...    71   5e-12
AF110774-1|AAF14857.1|  125|Homo sapiens adrenal gland protein A...    71   5e-12

>BC105294-1|AAI05295.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score = 70.9 bits (166), Expect = 5e-12
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCP 508
           EFL+  H          G L CP
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCP 101



 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 493 TLDLSKSGRQFPISKGIPNMLLNEAEVQ 576
           TL   +SGR FPIS+GIPNMLL+E E +
Sbjct: 97  TLQCPESGRMFPISRGIPNMLLSEEETE 124


>BC029482-1|AAH29482.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score = 70.9 bits (166), Expect = 5e-12
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCP 508
           EFL+  H          G L CP
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCP 101



 Score = 39.1 bits (87), Expect = 0.017
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 493 TLDLSKSGRQFPISKGIPNMLLNEAEVQ 576
           TL   +SGR FPIS+GIPNMLL+  E +
Sbjct: 97  TLQCPESGRMFPISRGIPNMLLSGEETE 124


>BC017172-1|AAH17172.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score = 70.9 bits (166), Expect = 5e-12
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCP 508
           EFL+  H          G L CP
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCP 101



 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 493 TLDLSKSGRQFPISKGIPNMLLNEAEVQ 576
           TL   +SGR FPIS+GIPNMLL+E E +
Sbjct: 97  TLQCPESGRMFPISRGIPNMLLSEEETE 124


>AF110774-1|AAF14857.1|  125|Homo sapiens adrenal gland protein
           AD-001 protein.
          Length = 125

 Score = 70.9 bits (166), Expect = 5e-12
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCP 508
           EFL+  H          G L CP
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCP 101



 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 493 TLDLSKSGRQFPISKGIPNMLLNEAEVQ 576
           TL   +SGR FPIS+GIPNMLL+E E +
Sbjct: 97  TLQCPESGRMFPISRGIPNMLLSEEETE 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,675,454
Number of Sequences: 237096
Number of extensions: 1914491
Number of successful extensions: 3733
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3729
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)