Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30398.Seq
(865 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 25 1.0
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 23 4.1
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 23 4.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 9.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.4
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.4
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 170 RFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIR 75
R++K VL +SG++ + T+H+ T+ A R
Sbjct: 268 RWIKMVLAESGVDTSIYTAHSTRHAATSAAAR 299
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 544 FLTFYIFYC 518
FL FY+FYC
Sbjct: 14 FLLFYLFYC 22
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 544 FLTFYIFYC 518
FL FY+FYC
Sbjct: 14 FLLFYLFYC 22
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 731 LFANYPSWRKGGXCCKAIKLGNARVFPVH 645
+FA+Y ++ G CK + G + FPV+
Sbjct: 385 IFASYFAYIFGKFACKIMIQGFSYAFPVN 413
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 731 LFANYPSWRKGGXCCKAIKLGNARVFPVH 645
+FA+Y ++ G CK + G + FPV+
Sbjct: 385 IFASYFAYIFGKFACKIMIQGFSYAFPVN 413
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 731 LFANYPSWRKGGXCCKAIKLGNARVFPVH 645
+FA+Y ++ G CK + G + FPV+
Sbjct: 385 IFASYFAYIFGKFACKIMIQGFSYAFPVN 413
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 731 LFANYPSWRKGGXCCKAIKLGNARVFPVH 645
+FA+Y ++ G CK + G + FPV+
Sbjct: 385 IFASYFAYIFGKFACKIMIQGFSYAFPVN 413
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 269 ISKALIAFYQKYVDEASKKEIKDI 340
I K +IAFY K + + EIK I
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFI 149
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 110 YTQHSMTTLAIRNCGGGXLTSE 45
YTQ+S+ A G G L+ +
Sbjct: 1069 YTQYSVVVQAFNKVGAGPLSDD 1090
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 50 SEYLDGLDGLTSCLLH 3
S Y+DG+ +T C +H
Sbjct: 143 SPYMDGVPFVTQCPIH 158
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 22 SPSRPSKYSDVRXPPP 69
SP P + DV+ PPP
Sbjct: 723 SPLTPHEAFDVKLPPP 738
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 22 SPSRPSKYSDVRXPPP 69
SP P + DV+ PPP
Sbjct: 615 SPLTPHEAFDVKLPPP 630
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,850
Number of Sequences: 336
Number of extensions: 4071
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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