Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30397.Seq
         (881 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119186-1|AAM51046.1|  574|Drosophila melanogaster SD10846p pro...   118   1e-26
AE014297-971|AAF54403.1|  574|Drosophila melanogaster CG8228-PA ...   118   1e-26
DQ655701-1|ABG45861.1|  813|Drosophila melanogaster JXC1 protein.      33   0.69 
AY058444-1|AAL13673.1|  813|Drosophila melanogaster GH22790p pro...    33   0.69 
AE013599-1347|AAF58619.2|  813|Drosophila melanogaster CG8991-PA...    33   0.69 
U63852-1|AAC47550.1|  655|Drosophila melanogaster SLY1 homologou...    30   4.9  
BT022422-1|AAY54838.1|  190|Drosophila melanogaster IP05647p pro...    30   4.9  
AY070995-1|AAL48617.1|  639|Drosophila melanogaster RE08679p pro...    30   4.9  
AE014134-420|AAS64626.1|  657|Drosophila melanogaster CG3539-PD,...    30   4.9  
AE014134-419|AAF51247.3|  639|Drosophila melanogaster CG3539-PC,...    30   4.9  
AY058250-1|AAL13479.1|  270|Drosophila melanogaster GH01278p pro...    29   8.5  
AE013599-1368|AAM68702.1|  270|Drosophila melanogaster CG8979-PC...    29   8.5  
AE013599-1367|AAM68701.1|  270|Drosophila melanogaster CG8979-PB...    29   8.5  
AE013599-1366|AAF58602.1|  270|Drosophila melanogaster CG8979-PA...    29   8.5  

>AY119186-1|AAM51046.1|  574|Drosophila melanogaster SD10846p
           protein.
          Length = 574

 Score =  118 bits (284), Expect = 1e-26
 Identities = 50/82 (60%), Positives = 67/82 (81%)
 Frame = +3

Query: 252 EHMKCIVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECDEEEAVREVQ 431
           +++KCIVFIRPT +NI LL+ ELR+PKY  Y+IYFSN++ + DIK LAECDE E+VREV+
Sbjct: 65  KYLKCIVFIRPTKQNIQLLANELRNPKYSAYYIYFSNIIPRTDIKYLAECDESESVREVK 124

Query: 432 EVFADYLAVDRHLFSFNIVGCL 497
           E++ADYL V+ +LFS  I  C+
Sbjct: 125 ELYADYLCVNPNLFSLGIPNCM 146



 Score = 92.7 bits (220), Expect = 6e-19
 Identities = 40/57 (70%), Positives = 51/57 (89%)
 Frame = +1

Query: 61  MNVIQAVKMYITKMTEESGPGMKVILMDKETTSIVSMVYSQSEILQKEVYLFERIDS 231
           MN+I  +K+YI KM  ESGPGMK+IL+DKETTSI+SM +SQS++LQ+EVYLFER+DS
Sbjct: 1   MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDS 57


>AE014297-971|AAF54403.1|  574|Drosophila melanogaster CG8228-PA
           protein.
          Length = 574

 Score =  118 bits (284), Expect = 1e-26
 Identities = 50/82 (60%), Positives = 67/82 (81%)
 Frame = +3

Query: 252 EHMKCIVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECDEEEAVREVQ 431
           +++KCIVFIRPT +NI LL+ ELR+PKY  Y+IYFSN++ + DIK LAECDE E+VREV+
Sbjct: 65  KYLKCIVFIRPTKQNIQLLANELRNPKYSAYYIYFSNIIPRTDIKYLAECDESESVREVK 124

Query: 432 EVFADYLAVDRHLFSFNIVGCL 497
           E++ADYL V+ +LFS  I  C+
Sbjct: 125 ELYADYLCVNPNLFSLGIPNCM 146



 Score = 92.7 bits (220), Expect = 6e-19
 Identities = 40/57 (70%), Positives = 51/57 (89%)
 Frame = +1

Query: 61  MNVIQAVKMYITKMTEESGPGMKVILMDKETTSIVSMVYSQSEILQKEVYLFERIDS 231
           MN+I  +K+YI KM  ESGPGMK+IL+DKETTSI+SM +SQS++LQ+EVYLFER+DS
Sbjct: 1   MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDS 57


>DQ655701-1|ABG45861.1|  813|Drosophila melanogaster JXC1 protein.
          Length = 813

 Score = 32.7 bits (71), Expect = 0.69
 Identities = 20/84 (23%), Positives = 32/84 (38%)
 Frame = +1

Query: 394 PNVMKRRLSERSRKFLLTTWLWTDTCSLSILLDASKVGLEPTASPXSFLKVCWAAPPVSE 573
           P++  + +   S   L+T  LW   C       AS + + P   P   +  C  +PP   
Sbjct: 329 PHLRDQAMDAGSEAGLITPDLWLRNCRSRSASPASTLSVSPGPPPAPAVSRCPDSPPSHH 388

Query: 574 AGEPXVRYXGSLRTLALVLAGEGP 645
             +P +      + LA    G GP
Sbjct: 389 PSKPLISVAPVSKLLAQKSPGPGP 412


>AY058444-1|AAL13673.1|  813|Drosophila melanogaster GH22790p
           protein.
          Length = 813

 Score = 32.7 bits (71), Expect = 0.69
 Identities = 20/84 (23%), Positives = 32/84 (38%)
 Frame = +1

Query: 394 PNVMKRRLSERSRKFLLTTWLWTDTCSLSILLDASKVGLEPTASPXSFLKVCWAAPPVSE 573
           P++  + +   S   L+T  LW   C       AS + + P   P   +  C  +PP   
Sbjct: 329 PHLRDQAMDAGSEAGLITPDLWLRNCRSRSASPASTLSVSPGPPPAPAVSRCPDSPPSHH 388

Query: 574 AGEPXVRYXGSLRTLALVLAGEGP 645
             +P +      + LA    G GP
Sbjct: 389 PSKPLISVAPVSKLLAQKSPGPGP 412


>AE013599-1347|AAF58619.2|  813|Drosophila melanogaster CG8991-PA
           protein.
          Length = 813

 Score = 32.7 bits (71), Expect = 0.69
 Identities = 20/84 (23%), Positives = 32/84 (38%)
 Frame = +1

Query: 394 PNVMKRRLSERSRKFLLTTWLWTDTCSLSILLDASKVGLEPTASPXSFLKVCWAAPPVSE 573
           P++  + +   S   L+T  LW   C       AS + + P   P   +  C  +PP   
Sbjct: 329 PHLRDQAMDAGSEAGLITPDLWLRNCRSRSASPASTLSVSPGPPPAPAVSRCPDSPPSHH 388

Query: 574 AGEPXVRYXGSLRTLALVLAGEGP 645
             +P +      + LA    G GP
Sbjct: 389 PSKPLISVAPVSKLLAQKSPGPGP 412


>U63852-1|AAC47550.1|  655|Drosophila melanogaster SLY1 homologous
           protein.
          Length = 655

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267 IVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECD-EEEAVREVQEVFA 443
           I F  PT EN+  + ++     Y VY + F   ++++ I+ LA        V  +  V+ 
Sbjct: 78  IYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137

Query: 444 DYL 452
            Y+
Sbjct: 138 QYV 140


>BT022422-1|AAY54838.1|  190|Drosophila melanogaster IP05647p
           protein.
          Length = 190

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267 IVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECD-EEEAVREVQEVFA 443
           I F  PT EN+  + ++     Y VY + F   ++++ I+ LA        V  +  V+ 
Sbjct: 78  IYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137

Query: 444 DYL 452
            Y+
Sbjct: 138 QYV 140


>AY070995-1|AAL48617.1|  639|Drosophila melanogaster RE08679p
           protein.
          Length = 639

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267 IVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECD-EEEAVREVQEVFA 443
           I F  PT EN+  + ++     Y VY + F   ++++ I+ LA        V  +  V+ 
Sbjct: 78  IYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137

Query: 444 DYL 452
            Y+
Sbjct: 138 QYV 140


>AE014134-420|AAS64626.1|  657|Drosophila melanogaster CG3539-PD,
           isoform D protein.
          Length = 657

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267 IVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECD-EEEAVREVQEVFA 443
           I F  PT EN+  + ++     Y VY + F   ++++ I+ LA        V  +  V+ 
Sbjct: 78  IYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137

Query: 444 DYL 452
            Y+
Sbjct: 138 QYV 140


>AE014134-419|AAF51247.3|  639|Drosophila melanogaster CG3539-PC,
           isoform C protein.
          Length = 639

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267 IVFIRPTSENIALLSRELRDPKYGVYFIYFSNVVSKADIKTLAECD-EEEAVREVQEVFA 443
           I F  PT EN+  + ++     Y VY + F   ++++ I+ LA        V  +  V+ 
Sbjct: 78  IYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137

Query: 444 DYL 452
            Y+
Sbjct: 138 QYV 140


>AY058250-1|AAL13479.1|  270|Drosophila melanogaster GH01278p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
           WN+ D      Y H +     +G++TEGSLLI
Sbjct: 72  WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103


>AE013599-1368|AAM68702.1|  270|Drosophila melanogaster CG8979-PC,
           isoform C protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
           WN+ D      Y H +     +G++TEGSLLI
Sbjct: 72  WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103


>AE013599-1367|AAM68701.1|  270|Drosophila melanogaster CG8979-PB,
           isoform B protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
           WN+ D      Y H +     +G++TEGSLLI
Sbjct: 72  WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103


>AE013599-1366|AAF58602.1|  270|Drosophila melanogaster CG8979-PA,
           isoform A protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
           WN+ D      Y H +     +G++TEGSLLI
Sbjct: 72  WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,550,382
Number of Sequences: 53049
Number of extensions: 580857
Number of successful extensions: 1291
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)