Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30396.Seq
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 124 4e-27
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 123 7e-27
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 95 2e-18
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 84 4e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 83 1e-14
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 76 1e-12
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 74 5e-12
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 73 9e-12
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 63 8e-09
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 57 7e-07
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 51 3e-05
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 51 3e-05
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 51 3e-05
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 50 8e-05
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 50 1e-04
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 50 1e-04
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.020
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 39 0.19
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 38 0.43
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 37 0.57
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 37 0.75
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 36 1.7
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 35 2.3
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 34 5.3
UniRef50_Q5A0J6 Cluster: Likely glycerol-3-phosphate acyltransfe... 33 7.0
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 33 9.3
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 124 bits (298), Expect = 4e-27
Identities = 54/77 (70%), Positives = 68/77 (88%)
Frame = +3
Query: 24 PIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ P LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VXIRXTVKGGGHVAQVY 254
V IR VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 122 bits (295), Expect = 9e-27
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVA PRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 123 bits (296), Expect = 7e-27
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
IRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVA PRRCEPKKFGGPGARARYQK
Sbjct: 86 IRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQK 145
Query: 437 SYR 445
SYR
Sbjct: 146 SYR 148
Score = 120 bits (288), Expect = 6e-26
Identities = 56/81 (69%), Positives = 68/81 (83%)
Frame = +3
Query: 12 ARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKE 191
A +E IQ+VQV GRK TATAVAYCKRG+G+L+VNGRPL+ + P L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 192 KFSMVXIRXTVKGGGHVAQVY 254
+F+ V IR VKGGG+VAQ+Y
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIY 84
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 101 bits (243), Expect = 2e-20
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
IRQAI+K+L+A+YQKYVDE SK ++K VQYDR+LLVA RR EPKKFGG GARARYQK
Sbjct: 93 IRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQK 152
Query: 437 SYR 445
SYR
Sbjct: 153 SYR 155
Score = 41.9 bits (94), Expect = 0.020
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 165 EPILLLGKEKFSMVXIRXTVKGGGHVAQVY 254
EP+L++G +KF+ V IR V GGGH +QVY
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVY 91
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/76 (53%), Positives = 59/76 (77%)
Frame = +3
Query: 27 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSMV 206
+ +VQ FG+K +ATAVA+ K G G+++VNG P+ LV P +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 207 XIRXTVKGGGHVAQVY 254
IR V GGGHV+QVY
Sbjct: 64 DIRVRVTGGGHVSQVY 79
Score = 93.5 bits (222), Expect = 6e-18
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
IRQAI+K L+A++QKYVDE SK E+K YDR+LL+A RR EPKKFGG GAR+R+QK
Sbjct: 81 IRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQK 140
Query: 437 SYR 445
SYR
Sbjct: 141 SYR 143
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 89.4 bits (212), Expect = 1e-16
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +2
Query: 227 GWWSCSTSLPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFG 406
G + S IRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+A RR EPKKFG
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFG 186
Query: 407 GPGARARYQKSYR 445
G GARAR QKSYR
Sbjct: 187 GHGARARRQKSYR 199
Score = 75.4 bits (177), Expect = 2e-12
Identities = 30/56 (53%), Positives = 47/56 (83%)
Frame = +3
Query: 33 AVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFS 200
+V FG+K TATAVA+CK G G++R+NG+P+ LV P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 84.2 bits (199), Expect = 4e-15
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
+R A +KA++AFY Y DE K+EI+ L+ +DR LVA R+ EPKKFGGPGARARYQK
Sbjct: 83 VRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQK 142
Query: 437 SYR 445
SYR
Sbjct: 143 SYR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = +2
Query: 227 GWWSCSTSLPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFG 406
G S + RQAI+K LIAF+QKY +E K +KD + YD+ LL+A PRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 407 GPGARARYQKSYR 445
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 IQAVQVFGRKXTATAVA-YCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSM 203
++ VQ FG+K TA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 204 VXIRXTVKGGGHVAQVY 254
+ I V GGG V+Q Y
Sbjct: 69 LRIDVAVHGGGQVSQAY 85
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
+RQAIS+ ++A + DEA++ E++ LV YDR L+V+ PRRCE KKFGG GARAR QK
Sbjct: 99 VRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQK 155
Query: 437 SYR 445
SYR
Sbjct: 156 SYR 158
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +3
Query: 9 EARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGK 188
E R V G+K + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 189 EKFSMVXIRXTVKGGGHVAQVY 254
F + + V GGGHV+Q+Y
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIY 97
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +2
Query: 221 SQGWWSCSTSLPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKK 400
S+G S IRQ+ISK L+ +Y KY+ + +K + YD+ LL++ R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 401 FGGPGARARYQKSYR 445
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/73 (36%), Positives = 44/73 (60%)
Frame = +3
Query: 36 VQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSMVXIR 215
+Q FG+K A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 216 XTVKGGGHVAQVY 254
KGGG V+Q+Y
Sbjct: 63 IFSKGGGKVSQIY 75
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 72.9 bits (171), Expect = 9e-12
Identities = 46/145 (31%), Positives = 64/145 (44%)
Frame = +3
Query: 27 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSMV 206
+Q+VQ+F K A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 207 XIRXTVKGGGHVAQVYLSDKLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLXXXX 386
I VKG GHV Q+Y + + P + T CWW
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 387 XXXXXXXXXXXXXDTRNLTVKPSRK 461
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
Score = 36.3 bits (80), Expect = 1.00
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQ 349
+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 95 VLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 63.3 bits (147), Expect = 8e-09
Identities = 25/74 (33%), Positives = 49/74 (66%)
Frame = +3
Query: 27 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSMV 206
++ +Q G++ TA A A + G G +R+NG+P++++ P + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 207 XIRXTVKGGGHVAQ 248
I V+GGG + Q
Sbjct: 61 DIDVKVQGGGFMGQ 74
Score = 44.0 bits (99), Expect = 0.005
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 278 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKK--FGGPGARARYQKSYR 445
A IA + V+ +K+ ++YDR++LV PRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 56.8 bits (131), Expect = 7e-07
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 PIQAVQVFGRKXTATAVAYCKRGHGMLRVNG-RPLDLVXPXLLQYKLQEPILLLGKEKFS 200
P+Q+ QVFG K A +A +G +++V L++ P QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 201 MVXIRXTVKGGGHVAQVY 254
V I V G G VAQ+Y
Sbjct: 83 RVGIWVRVNGVGRVAQIY 100
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +2
Query: 635 LQRRDWEXPGVTQLNRLAXIPLLAXWGNSE 724
LQRRDWE PGVTQLNRLA P A W NSE
Sbjct: 72 LQRRDWENPGVTQLNRLAAHPPFASWRNSE 101
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +2
Query: 635 LQRRDWEXPGVTQLNRLAXIPLLAXWGNSE 724
LQRRDWE PGVTQLNRLA P A W NSE
Sbjct: 26 LQRRDWENPGVTQLNRLAAHPPFASWRNSE 55
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +2
Query: 635 LQRRDWEXPGVTQLNRLAXIPLLAXWGNSE 724
LQRRDWE PGVTQLNRLA P A W NSE
Sbjct: 30 LQRRDWENPGVTQLNRLAAHPPFASWRNSE 59
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +2
Query: 635 LQRRDWEXPGVTQLNRLAXIPLLAXWGNSE 724
LQRRDWE PGVTQLNRLA P A W NSE
Sbjct: 12 LQRRDWENPGVTQLNRLAAHPPFASWRNSE 41
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 50.0 bits (114), Expect = 8e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +2
Query: 311 EASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQKSYR 445
+ ++++++ + +D+ L+ RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +3
Query: 633 FYNVVTGKXLGLPNLIALQXSPFWPXGVIAXXAR 734
FYNVVTGK L LPNLIALQ P P GVI+ AR
Sbjct: 9 FYNVVTGKTLALPNLIALQHIPLSPAGVISEEAR 42
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 48 GRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLLGKEKFSMVXIRXTVK 227
G++ A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IR V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 228 GGGHVAQ 248
GGG + Q
Sbjct: 71 GGGVMGQ 77
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Frame = +2
Query: 257 IRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGG 409
+R AI++ L+ F++ + +D+ S+ +++ +++DR++LV PRR EP+K+
Sbjct: 81 VRMAIARGLVEFFRCEESDDELCRMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMR 139
Query: 410 PGARARYQKSYR 445
AR R+QKSYR
Sbjct: 140 YSARRRWQKSYR 151
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 18 REPIQAVQVFGRKXTATAVAYCKRGHGMLRV 110
R P VQ FGRK TA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 38.7 bits (86), Expect = 0.19
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 48 GRKXTATAVAYCKRGHGMLRVNGRPLD--LVXPXLLQYKLQEPILLLGKEKFSMVXIRXT 221
G++ A A + K G G + VNG+PLD L L+ +++ P++L+ +E I
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 222 VKGGGHVAQ 248
V GGG AQ
Sbjct: 69 VLGGGFAAQ 77
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 37.5 bits (83), Expect = 0.43
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 48 GRKXTATAVAYCKRGHGMLRVNGRPLD-LVXPXLLQYKLQEPILLLGKEKFSMVXIRXTV 224
GR+ T+TA + +G G + VNG+PLD + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 225 KGGG 236
KGGG
Sbjct: 66 KGGG 69
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 37.1 bits (82), Expect = 0.57
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKXTATAVAYCKRGHGMLRVNGRP-LDLVXPXLLQYKLQEPILLLGKEKFSMVXIRXTV 224
GR+ T+ A G G + VNG P L+ L L++P++ G EK I TV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 225 KGGGHVAQ 248
KGGG Q
Sbjct: 69 KGGGFTGQ 76
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 36.7 bits (81), Expect = 0.75
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 611 LQFHWPSFLQRRDWEXPGVTQLNRLAXIPLLAXWGNSE 724
+Q P L RRDWE P +TQ +RL P W + E
Sbjct: 11 VQLSLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVE 48
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 35.5 bits (78), Expect = 1.7
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 36 VQVFGRKXTATAVAYCKRGHGMLRVNGRPL-DLVXPXLLQYKLQEPILL-LGKEKFSMVX 209
+ GR+ TA A Y K G G+++VN P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 210 IRXTVKGGG 236
V GGG
Sbjct: 67 --IKVSGGG 73
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 35.1 bits (77), Expect = 2.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 629 SFLQRRDWEXPGVTQLNRLAXIPLLAXWGNSEXGPQPXXLSQKXWPLXLGDWAN 790
+FL+RR+ + PG QLN L +PL ++ P P LS K WP G N
Sbjct: 58 AFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAP-PNRLS-KNWPPPEGQRQN 109
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 33.9 bits (74), Expect = 5.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKXTATAVAYCKRGHGMLRVNGRPLD-LVXPXLLQYKLQEPILLLGKEKFSMVXIRXTV 224
GR+ T++A + + G G + +NG PLD + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 225 KGGGHVAQ 248
+GGG Q
Sbjct: 71 QGGGDSGQ 78
>UniRef50_Q5A0J6 Cluster: Likely glycerol-3-phosphate
acyltransferase Gpt2; n=5; Saccharomycetales|Rep: Likely
glycerol-3-phosphate acyltransferase Gpt2 - Candida
albicans (Yeast)
Length = 718
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 251 LPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 367
LP+ + + LI YQ+Y DE K+++D + Y+R+L+
Sbjct: 385 LPMVVEMDRRLIKGYQQYKDEPDVKKLRDAVYHYNRTLM 423
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 33.1 bits (72), Expect = 9.3
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 12 ARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYK-LQEPILL 179
ARR P+ + VF R ++ V K G G+ + G LD P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,553,533
Number of Sequences: 1657284
Number of extensions: 15363975
Number of successful extensions: 28287
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28284
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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