Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30396.Seq
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   138   1e-32
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   138   1e-32

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  138 bits (333), Expect = 1e-32
 Identities = 62/84 (73%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   VQEARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLL 182
           +Q+ RREP+QAVQVFGRK TATAVAYCKRG+G+L+VNGRPL+ + P +LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 183 GKEKFSMVXIRXTVKGGGHVAQVY 254
           GKEKF+ V IR  V GGGHVAQ+Y
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIY 84



 Score =  127 bits (306), Expect = 2e-29
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +2

Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
           IRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV  PRRCEPKKFGGPGARARYQK
Sbjct: 86  IRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQK 145

Query: 437 SYR 445
           SYR
Sbjct: 146 SYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  138 bits (333), Expect = 1e-32
 Identities = 62/84 (73%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   VQEARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPXLLQYKLQEPILLL 182
           +Q+ RREP+QAVQVFGRK TATAVAYCKRG+G+L+VNGRPL+ + P +LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 183 GKEKFSMVXIRXTVKGGGHVAQVY 254
           GKEKF+ V IR  V GGGHVAQ+Y
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIY 84



 Score =  127 bits (306), Expect = 2e-29
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +2

Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAXPRRCEPKKFGGPGARARYQK 436
           IRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV  PRRCEPKKFGGPGARARYQK
Sbjct: 86  IRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQK 145

Query: 437 SYR 445
           SYR
Sbjct: 146 SYR 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,701,284
Number of Sequences: 53049
Number of extensions: 718173
Number of successful extensions: 1181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)