Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30395.Seq
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 75 5e-14
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 72 4e-13
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 72 4e-13
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 72 6e-13
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 72 6e-13
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.43
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 32 0.43
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 32 0.43
AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine re... 29 3.0
AF039053-2|AAC25877.3| 294|Caenorhabditis elegans Serpentine re... 29 4.0
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 29 5.3
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 29 5.3
U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical pr... 28 7.0
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 9.2
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 9.2
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 9.2
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 9.2
AL031630-15|CAA20994.1| 244|Caenorhabditis elegans Hypothetical... 28 9.2
AF003136-4|AAK93853.2| 368|Caenorhabditis elegans Acyltransfera... 28 9.2
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 75.4 bits (177), Expect = 5e-14
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +2
Query: 353 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRATHGFETIESI 532
+V F +L YV G+TAGAHRLWSHKSYKA P++I LM+ ++A Q +
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 533 TS--TAIRTQIHITQAVGSFILIXGWLFVRKHPEVKKE 640
T H T G F GWL VRKHP+VK++
Sbjct: 137 HHKWTDTDADPHNTTR-GFFFAHMGWLLVRKHPQVKEQ 173
Score = 64.9 bits (151), Expect = 7e-11
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Frame = +1
Query: 253 RYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWA---FSWIRVP-----VLCSSND-WRYS 405
+ EIV++N+ + LH GLY AKW F+++ + ++ W +
Sbjct: 44 KMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHK 103
Query: 406 WSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLF 585
S + P I I N ++ Q+ W RDHR HHK++DTDADPHN +RG F
Sbjct: 104 -SYKATTPMRIFLMIL-----NNIAL--QNDVIEWARDHRCHHKWTDTDADPHNTTRGFF 155
Query: 586 YSHIXXVVRQKTP 624
++H+ ++ +K P
Sbjct: 156 FAHMGWLLVRKHP 168
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 75.4 bits (177), Expect = 5e-14
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +2
Query: 353 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRATHGFETIESI 532
+V F +L YV G+TAGAHRLWSHKSYKA P++I LM+ ++A Q +
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 533 TS--TAIRTQIHITQAVGSFILIXGWLFVRKHPEVKKE 640
T H T G F GWL VRKHP+VK++
Sbjct: 137 HHKWTDTDADPHNTTR-GFFFAHMGWLLVRKHPQVKEQ 173
Score = 64.9 bits (151), Expect = 7e-11
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Frame = +1
Query: 253 RYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWA---FSWIRVP-----VLCSSND-WRYS 405
+ EIV++N+ + LH GLY AKW F+++ + ++ W +
Sbjct: 44 KMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHK 103
Query: 406 WSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLF 585
S + P I I N ++ Q+ W RDHR HHK++DTDADPHN +RG F
Sbjct: 104 -SYKATTPMRIFLMIL-----NNIAL--QNDVIEWARDHRCHHKWTDTDADPHNTTRGFF 155
Query: 586 YSHIXXVVRQKTP 624
++H+ ++ +K P
Sbjct: 156 FAHMGWLLVRKHP 168
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 72.1 bits (169), Expect = 4e-13
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +2
Query: 362 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRATHGFETIESITS- 538
F++ YV + G+TAGAHRLWSHKSYKA P++I LM+ ++A Q +
Sbjct: 79 FSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHK 138
Query: 539 -TAIRTQIHITQAVGSFILIXGWLFVRKHPEVKKERETNRPFXICFVNPGINVSAPGIRK 715
T H T G F GWL VRKHP+V KE F +P + RK
Sbjct: 139 WTDTDADPHNTTR-GFFFTHMGWLLVRKHPQV-KEHGGKLDLSDLFSDPVLVFQ----RK 192
Query: 716 HFIPXGLL 739
H+ P +L
Sbjct: 193 HYFPLVIL 200
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Frame = +1
Query: 253 RYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWAFSWIRVPVLCSSND---------WRYS 405
+ EIV++N+ + LHV GLY AKW + + S W +
Sbjct: 43 KMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHK 102
Query: 406 WSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLF 585
T +I + N ++ Q+ W RDHR HHK++DTDADPHN +RG F
Sbjct: 103 SYKATTPMRIFLMLL------NNIAL--QNDIIEWARDHRCHHKWTDTDADPHNTTRGFF 154
Query: 586 YSHIXXVVRQKTP*S*EGKGN**TFSDLF 672
++H+ ++ +K P E G SDLF
Sbjct: 155 FTHMGWLLVRKHPQVKEHGGK-LDLSDLF 182
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 72.1 bits (169), Expect = 4e-13
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +2
Query: 362 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRATHGFETIESITS- 538
F++ YV + G+TAGAHRLWSHKSYKA P++I LM+ ++A Q +
Sbjct: 79 FSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHK 138
Query: 539 -TAIRTQIHITQAVGSFILIXGWLFVRKHPEVKKERETNRPFXICFVNPGINVSAPGIRK 715
T H T G F GWL VRKHP+V KE F +P + RK
Sbjct: 139 WTDTDADPHNTTR-GFFFTHMGWLLVRKHPQV-KEHGGKLDLSDLFSDPVLVFQ----RK 192
Query: 716 HFIPXGLL 739
H+ P +L
Sbjct: 193 HYFPLVIL 200
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Frame = +1
Query: 253 RYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWAFSWIRVPVLCSSND---------WRYS 405
+ EIV++N+ + LHV GLY AKW + + S W +
Sbjct: 43 KMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHK 102
Query: 406 WSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLF 585
T +I + N ++ Q+ W RDHR HHK++DTDADPHN +RG F
Sbjct: 103 SYKATTPMRIFLMLL------NNIAL--QNDIIEWARDHRCHHKWTDTDADPHNTTRGFF 154
Query: 586 YSHIXXVVRQKTP*S*EGKGN**TFSDLF 672
++H+ ++ +K P E G SDLF
Sbjct: 155 FTHMGWLLVRKHPQVKEHGGK-LDLSDLF 182
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 71.7 bits (168), Expect = 6e-13
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Frame = +1
Query: 253 RYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWA-FSWIRVPVLCSSND--------WRYS 405
+ EIV+KN+ + + LH+ GLY AKWA W+ + S W +
Sbjct: 35 KMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHR 94
Query: 406 WSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLF 585
T+ ++ I N ++F Q+ W RDHR HHK++DTDADPH+ +RG+F
Sbjct: 95 AYKATLSWRVFLMLI------NSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRGMF 146
Query: 586 YSHIXXVVRQK 618
++H+ ++ +K
Sbjct: 147 FAHMGWLLVKK 157
Score = 63.7 bits (148), Expect = 2e-10
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +2
Query: 329 VVRQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRATH 508
+V Q +VG+ +L + ++GVT GAHRLW+H++YKA L ++ LM+ S+A Q
Sbjct: 60 LVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDII 119
Query: 509 GFETIESITS--TAIRTQIHITQAVGSFILIXGWLFVRKHPEVK 634
+ T H T G F GWL V+KH ++K
Sbjct: 120 DWARDHRCHHKWTDTDADPHSTNR-GMFFAHMGWLLVKKHDQLK 162
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 71.7 bits (168), Expect = 6e-13
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Frame = +1
Query: 253 RYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWA-FSWIRVPVLCSSND--------WRYS 405
+ EIV+KN+ + + LH+ GLY AKWA W+ + S W +
Sbjct: 35 KMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHR 94
Query: 406 WSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLF 585
T+ ++ I N ++F Q+ W RDHR HHK++DTDADPH+ +RG+F
Sbjct: 95 AYKATLSWRVFLMLI------NSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRGMF 146
Query: 586 YSHIXXVVRQK 618
++H+ ++ +K
Sbjct: 147 FAHMGWLLVKK 157
Score = 63.7 bits (148), Expect = 2e-10
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +2
Query: 329 VVRQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRATH 508
+V Q +VG+ +L + ++GVT GAHRLW+H++YKA L ++ LM+ S+A Q
Sbjct: 60 LVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDII 119
Query: 509 GFETIESITS--TAIRTQIHITQAVGSFILIXGWLFVRKHPEVK 634
+ T H T G F GWL V+KH ++K
Sbjct: 120 DWARDHRCHHKWTDTDADPHSTNR-GMFFAHMGWLLVKKHDQLK 162
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1
Query: 337 TAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVR 516
TA +A S+ PV+ ++ D SWS+ + PQ + +K T+S GL G ++ ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 517 DHRVHHKYSDTDAD 558
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1
Query: 337 TAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVR 516
TA +A S+ PV+ ++ D SWS+ + PQ + +K T+S GL G ++ ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 517 DHRVHHKYSDTDAD 558
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1
Query: 337 TAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVR 516
TA +A S+ PV+ ++ D SWS+ + PQ + +K T+S GL G ++ ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 517 DHRVHHKYSDTDAD 558
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1
Query: 337 TAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVR 516
TA +A S+ PV+ ++ D SWS+ + PQ + +K T+S GL G ++ ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 517 DHRVHHKYSDTDAD 558
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 12 protein.
Length = 293
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -3
Query: 298 VDKYV*IYFYRRFHISRSYH*RFDTIMF*TRIFYFGYNQSIIRLILCHFRI 146
V++ V YF ++H +YH F I +G+N+ I+ + C F++
Sbjct: 101 VERVVAAYFPIQYH---NYHQSFPKIPIMITAIIYGFNEDIVLYVFCDFQL 148
>AF039053-2|AAC25877.3| 294|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 20 protein.
Length = 294
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 298 VDKYV*IYFYRRFHISRSYH*RFDTIMF*TRIFYFGYNQSIIRLILCHFRIM*TPRTSAL 119
V++ V YF FH R + RF + +FY G + I+ + C F++ P A
Sbjct: 102 VERVVASYFPIFFHNHRKF--RFKVFIMILAVFY-GLTEDIVLYVFCDFQLKLVPNCVAF 158
Query: 118 HFTLLA 101
T+ A
Sbjct: 159 GCTINA 164
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 611 VRKHPEVKKERETNRPFXICFVNPGINVSAPGIRKHF 721
+R HP+ KE + F CF N + P R F
Sbjct: 75 IRLHPQGNKESNKDFTFFQCFTNQATTTTTPTFRAKF 111
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 611 VRKHPEVKKERETNRPFXICFVNPGINVSAPGIRKHF 721
+R HP+ KE + F CF N + P R F
Sbjct: 82 IRLHPQGNKESNKDFTFFQCFTNQATTTTTPTFRAKF 118
>U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical
protein ZK1248.9 protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 415 QTVVPQIIQSKITSSNPTNGLSFTGQSKSHPWVRDHRVHHKYSDTDADPHNASRGLFY 588
QTV+ ++ + IT +P+NGLS + K+ P ++ + Y T H G+F+
Sbjct: 298 QTVIQKLFE--ITGQDPSNGLSSMAREKATPVIKGLDCYSMY--TSRKRHLRIVGIFH 351
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +1
Query: 322 YLCCTTAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKS 501
Y TT+ ++ SW R SS S SS+T S +TSSNP N T S S
Sbjct: 10 YSVLTTSSFS-SWRR-----SSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSSS 63
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +1
Query: 322 YLCCTTAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKS 501
Y TT+ ++ SW R SS S SS+T S +TSSNP N T S S
Sbjct: 14 YSVLTTSSFS-SWRR-----SSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSSS 67
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +1
Query: 322 YLCCTTAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKS 501
Y TT+ ++ SW R SS S SS+T S +TSSNP N T S S
Sbjct: 10 YSVLTTSSFS-SWRR-----SSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSSS 63
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +1
Query: 322 YLCCTTAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKS 501
Y TT+ ++ SW R SS S SS+T S +TSSNP N T S S
Sbjct: 14 YSVLTTSSFS-SWRR-----SSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSSS 67
>AL031630-15|CAA20994.1| 244|Caenorhabditis elegans Hypothetical
protein Y38H6C.16 protein.
Length = 244
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 307 MFYGLYLCCTTAKWAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNP-TNGL-S 480
+F+G++L T K A S R PVL W +W + V ++ T P TN
Sbjct: 38 LFFGIFLFLTIIKLASSMPRPPVL---PPWVATWLLVSGVICLVDVIYTMFRPYTNAPDG 94
Query: 481 FTGQSKSHPWVRDHRVHHKYSDT 549
F + + W V +Y+DT
Sbjct: 95 FVSNTLFYGWKLYSSVDIRYADT 117
>AF003136-4|AAK93853.2| 368|Caenorhabditis elegans
Acyltransferase-like protein 11 protein.
Length = 368
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 500 ATHGFETIESITSTAIRTQIHITQAVGSFILIXGWLFVRKHPE 628
A HG + E ++ IH+ G +I G+++VR+ E
Sbjct: 113 ARHGDQGNEQAFRVMVKNSIHLVPMFGWYIFQHGYIYVRRFGE 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,253,330
Number of Sequences: 27780
Number of extensions: 412465
Number of successful extensions: 939
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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