Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30393.Seq
(640 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p pro... 140 1e-33
AY071246-1|AAL48868.1| 165|Drosophila melanogaster RE28824p pro... 140 1e-33
AE013599-3797|AAF47152.1| 165|Drosophila melanogaster CG3195-PC... 140 1e-33
AE013599-3796|AAM68299.1| 165|Drosophila melanogaster CG3195-PB... 140 1e-33
AE013599-3795|AAM68298.1| 165|Drosophila melanogaster CG3195-PA... 140 1e-33
AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodom... 31 1.7
AE013599-764|AAF59005.1| 389|Drosophila melanogaster CG13744-PA... 30 2.3
>BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p
protein.
Length = 307
Score = 140 bits (339), Expect = 1e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++
Sbjct: 194 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 253
Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
IA++MR RSMAR L G+ KE+LGTA +
Sbjct: 254 IARVMRPRSMARELKGTCKEVLGTAQSV 281
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLXPKIGPLGLSPKKVGDDIAKAT 252
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGPLGLSPKK+GDDIAKAT
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 192
Score = 41.9 bits (94), Expect = 7e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 506 SQSVGCTVEGRPPHDLIDDINSG 574
+QSVGCTV+G+ PHD+ID++N G
Sbjct: 278 AQSVGCTVDGKHPHDVIDELNEG 300
>AY071246-1|AAL48868.1| 165|Drosophila melanogaster RE28824p
protein.
Length = 165
Score = 140 bits (339), Expect = 1e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111
Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
IA++MR RSMAR L G+ KE+LGTA +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLXPKIGPLGLSPKKVGDDIAKAT 252
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGPLGLSPKK+GDDIAKAT
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50
Score = 41.9 bits (94), Expect = 7e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 506 SQSVGCTVEGRPPHDLIDDINSG 574
+QSVGCTV+G+ PHD+ID++N G
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEG 158
>AE013599-3797|AAF47152.1| 165|Drosophila melanogaster CG3195-PC,
isoform C protein.
Length = 165
Score = 140 bits (339), Expect = 1e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111
Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
IA++MR RSMAR L G+ KE+LGTA +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLXPKIGPLGLSPKKVGDDIAKAT 252
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGPLGLSPKK+GDDIAKAT
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50
Score = 41.9 bits (94), Expect = 7e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 506 SQSVGCTVEGRPPHDLIDDINSG 574
+QSVGCTV+G+ PHD+ID++N G
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEG 158
>AE013599-3796|AAM68299.1| 165|Drosophila melanogaster CG3195-PB,
isoform B protein.
Length = 165
Score = 140 bits (339), Expect = 1e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111
Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
IA++MR RSMAR L G+ KE+LGTA +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLXPKIGPLGLSPKKVGDDIAKAT 252
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGPLGLSPKK+GDDIAKAT
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50
Score = 41.9 bits (94), Expect = 7e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 506 SQSVGCTVEGRPPHDLIDDINSG 574
+QSVGCTV+G+ PHD+ID++N G
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEG 158
>AE013599-3795|AAM68298.1| 165|Drosophila melanogaster CG3195-PA,
isoform A protein.
Length = 165
Score = 140 bits (339), Expect = 1e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111
Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
IA++MR RSMAR L G+ KE+LGTA +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLXPKIGPLGLSPKKVGDDIAKAT 252
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGPLGLSPKK+GDDIAKAT
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50
Score = 41.9 bits (94), Expect = 7e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 506 SQSVGCTVEGRPPHDLIDDINSG 574
+QSVGCTV+G+ PHD+ID++N G
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEG 158
>AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodomain
protein protein.
Length = 1081
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 452 KQINGPVPFWLSKRDSWHSQSVGCTVEGRPPHDLIDDIN 568
+Q N P+PF L +RD H Q G V P H + DIN
Sbjct: 102 QQTNMPLPFGLLERDRQHMQH-GREVNTSPVHFVSSDIN 139
>AE013599-764|AAF59005.1| 389|Drosophila melanogaster CG13744-PA
protein.
Length = 389
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 502 PRISF--TEPERYRAIDLFLMIFAMPITSSREMLPLCL 395
PR +F T+P+RY D+ L+ A P + + +LP+CL
Sbjct: 224 PRFNFRMTQPDRY---DIALLKLAQPTSFTEHILPICL 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,294,876
Number of Sequences: 53049
Number of extensions: 630233
Number of successful extensions: 1324
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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