Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30391.Seq
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 655 ANVXFRPXDSGLXAKTGVXNSVR--TKKG 735
           AN+  RP DSGL     V  +V+  TKKG
Sbjct: 379 ANLYSRPGDSGLDLFLSVDYAVKFWTKKG 407


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 222 EGAQKEDQRSRKENKGKPEPKPAK 293
           +G   ++Q    EN   P+P+P K
Sbjct: 236 KGRLTDEQLKELENPPTPKPRPTK 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,951
Number of Sequences: 336
Number of extensions: 2761
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)