Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30388.Seq
(429 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p pro... 129 1e-30
AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,... 129 1e-30
AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,... 129 1e-30
AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,... 129 1e-30
AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p pro... 28 4.6
AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB... 28 4.6
AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA... 28 4.6
AY118429-1|AAM48458.1| 163|Drosophila melanogaster RH26504p pro... 28 6.1
AE014296-3393|AAN12138.1| 163|Drosophila melanogaster CG5104-PB... 28 6.1
>AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p
protein.
Length = 124
Score = 129 bits (312), Expect = 1e-30
Identities = 57/79 (72%), Positives = 69/79 (87%)
Frame = +1
Query: 19 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 198
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 199 VDTRLNKFLWSKGVRNVPF 255
+DTRLNK +WSKG+R+ PF
Sbjct: 61 IDTRLNKHIWSKGIRSTPF 79
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3
Query: 285 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 389
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,
isoform C protein.
Length = 124
Score = 129 bits (312), Expect = 1e-30
Identities = 57/79 (72%), Positives = 69/79 (87%)
Frame = +1
Query: 19 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 198
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 199 VDTRLNKFLWSKGVRNVPF 255
+DTRLNK +WSKG+R+ PF
Sbjct: 61 IDTRLNKHIWSKGIRSTPF 79
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3
Query: 285 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 389
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,
isoform B protein.
Length = 124
Score = 129 bits (312), Expect = 1e-30
Identities = 57/79 (72%), Positives = 69/79 (87%)
Frame = +1
Query: 19 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 198
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 199 VDTRLNKFLWSKGVRNVPF 255
+DTRLNK +WSKG+R+ PF
Sbjct: 61 IDTRLNKHIWSKGIRSTPF 79
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3
Query: 285 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 389
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,
isoform A protein.
Length = 124
Score = 129 bits (312), Expect = 1e-30
Identities = 57/79 (72%), Positives = 69/79 (87%)
Frame = +1
Query: 19 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 198
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 199 VDTRLNKFLWSKGVRNVPF 255
+DTRLNK +WSKG+R+ PF
Sbjct: 61 IDTRLNKHIWSKGIRSTPF 79
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3
Query: 285 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 389
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p
protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 52 SAINEVVTREYTVNLHKRLHGVGFKKRA 135
S+I+E VT EY +LH HG GF ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581
>AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB,
isoform B protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 52 SAINEVVTREYTVNLHKRLHGVGFKKRA 135
S+I+E VT EY +LH HG GF ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581
>AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA,
isoform A protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 52 SAINEVVTREYTVNLHKRLHGVGFKKRA 135
S+I+E VT EY +LH HG GF ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581
>AY118429-1|AAM48458.1| 163|Drosophila melanogaster RH26504p
protein.
Length = 163
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -2
Query: 287 ITSS*KPHTDTKGTFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLN 120
+ S +P + + + +T ++ + STR+ G ICF+ +SL+ A FL+
Sbjct: 7 VLSGDEPTPEEESSIITQINDMSTLSW-STRIKGFVICFALGILLSLLGSVALFLH 61
>AE014296-3393|AAN12138.1| 163|Drosophila melanogaster CG5104-PB
protein.
Length = 163
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -2
Query: 287 ITSS*KPHTDTKGTFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLN 120
+ S +P + + + +T ++ + STR+ G ICF+ +SL+ A FL+
Sbjct: 7 VLSGDEPTPEEESSIITQINDMSTLSW-STRIKGFVICFALGILLSLLGSVALFLH 61
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,828,963
Number of Sequences: 53049
Number of extensions: 312752
Number of successful extensions: 761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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