Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30387.Seq
(783 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113254-1|AAM29259.1| 322|Drosophila melanogaster AT14373p pro... 115 6e-26
AE014297-3840|AAN14062.1| 322|Drosophila melanogaster CG4774-PC... 115 6e-26
AE014297-3839|AAF56497.2| 322|Drosophila melanogaster CG4774-PB... 115 6e-26
AE014297-3838|AAF56496.2| 322|Drosophila melanogaster CG4774-PA... 115 6e-26
BT009989-1|AAQ22458.1| 582|Drosophila melanogaster RE48393p pro... 29 9.5
AE014298-528|AAN09095.1| 582|Drosophila melanogaster CG12206-PC... 29 9.5
AE014298-527|AAN09094.1| 582|Drosophila melanogaster CG12206-PB... 29 9.5
AE014298-526|AAF45872.2| 582|Drosophila melanogaster CG12206-PA... 29 9.5
>AY113254-1|AAM29259.1| 322|Drosophila melanogaster AT14373p
protein.
Length = 322
Score = 115 bits (277), Expect = 6e-26
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -1
Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
+ DL+P+ L ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264
Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
T VQL +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288
Score = 73.3 bits (172), Expect = 3e-13
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -2
Query: 656 GTGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
G LL FAGITDLLDG IAR W Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 155 GMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 760 EKENVFTIPTILCITRISQCRPYLGYVIIQNNYNLAL 650
E+EN+ TIP +L I+R + PY+GYVI+Q ++ L +
Sbjct: 121 ERENIMTIPNMLTISR-AVLSPYIGYVIVQGDFTLGM 156
>AE014297-3840|AAN14062.1| 322|Drosophila melanogaster CG4774-PC,
isoform C protein.
Length = 322
Score = 115 bits (277), Expect = 6e-26
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -1
Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
+ DL+P+ L ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264
Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
T VQL +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288
Score = 73.3 bits (172), Expect = 3e-13
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -2
Query: 656 GTGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
G LL FAGITDLLDG IAR W Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 155 GMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 760 EKENVFTIPTILCITRISQCRPYLGYVIIQNNYNLAL 650
E+EN+ TIP +L I+R + PY+GYVI+Q ++ L +
Sbjct: 121 ERENIMTIPNMLTISR-AVLSPYIGYVIVQGDFTLGM 156
>AE014297-3839|AAF56497.2| 322|Drosophila melanogaster CG4774-PB,
isoform B protein.
Length = 322
Score = 115 bits (277), Expect = 6e-26
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -1
Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
+ DL+P+ L ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264
Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
T VQL +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288
Score = 73.3 bits (172), Expect = 3e-13
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -2
Query: 656 GTGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
G LL FAGITDLLDG IAR W Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 155 GMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 760 EKENVFTIPTILCITRISQCRPYLGYVIIQNNYNLAL 650
E+EN+ TIP +L I+R + PY+GYVI+Q ++ L +
Sbjct: 121 ERENIMTIPNMLTISR-AVLSPYIGYVIVQGDFTLGM 156
>AE014297-3838|AAF56496.2| 322|Drosophila melanogaster CG4774-PA,
isoform A protein.
Length = 322
Score = 115 bits (277), Expect = 6e-26
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -1
Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
+ DL+P+ L ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264
Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
T VQL +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288
Score = 73.3 bits (172), Expect = 3e-13
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -2
Query: 656 GTGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
G LL FAGITDLLDG IAR W Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 155 GMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 760 EKENVFTIPTILCITRISQCRPYLGYVIIQNNYNLAL 650
E+EN+ TIP +L I+R + PY+GYVI+Q ++ L +
Sbjct: 121 ERENIMTIPNMLTISR-AVLSPYIGYVIVQGDFTLGM 156
>BT009989-1|AAQ22458.1| 582|Drosophila melanogaster RE48393p
protein.
Length = 582
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 411 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 313
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>AE014298-528|AAN09095.1| 582|Drosophila melanogaster CG12206-PC,
isoform C protein.
Length = 582
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 411 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 313
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>AE014298-527|AAN09094.1| 582|Drosophila melanogaster CG12206-PB,
isoform B protein.
Length = 582
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 411 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 313
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>AE014298-526|AAF45872.2| 582|Drosophila melanogaster CG12206-PA,
isoform A protein.
Length = 582
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 411 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 313
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,560,227
Number of Sequences: 53049
Number of extensions: 690800
Number of successful extensions: 1279
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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