Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30384.Seq
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 136 4e-31
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 129 4e-29
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 105 9e-22
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 99 6e-20
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 86 5e-16
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 84 2e-15
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 82 7e-15
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 81 2e-14
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 81 2e-14
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 71 1e-11
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 69 1e-10
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 62 1e-08
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 57 2e-07
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 54 3e-06
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 45 0.001
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 44 0.002
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 42 0.010
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 41 0.017
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 41 0.017
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 38 0.12
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 38 0.21
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 38 0.21
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 37 0.28
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 37 0.28
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 36 0.64
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 36 0.64
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 36 0.64
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 36 0.64
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 36 0.85
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 36 0.85
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 34 2.0
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 34 2.6
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 34 2.6
UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1; Ba... 33 4.5
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 33 4.5
UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma cr... 32 7.9
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 136 bits (328), Expect = 4e-31
Identities = 60/81 (74%), Positives = 74/81 (91%)
Frame = +1
Query: 13 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VXIRXTVKGGGHVAQVYAIRQ 255
V IR VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 3e-26
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 129 bits (312), Expect = 4e-29
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKE 180
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ + P L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 181 KFSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
+F+ V IR VKGGG+VAQ+YAIRQ +
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISK 92
Score = 120 bits (289), Expect = 2e-26
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 105 bits (251), Expect = 9e-22
Identities = 46/80 (57%), Positives = 64/80 (80%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LV P +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR V GGGHV+QVYAIRQ
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQ 83
Score = 90.6 bits (215), Expect = 2e-17
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 99.1 bits (236), Expect = 6e-20
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 154 EPILLLGKEKFSMVXIRXTVKGGGHVAQVYAIRQ 255
EP+L++G +KF+ V IR V GGGH +QVYAIRQ
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQ 95
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 86.2 bits (204), Expect = 5e-16
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFGG GARAR QKSYR
Sbjct: 140 AIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
Score = 78.2 bits (184), Expect = 1e-13
Identities = 31/56 (55%), Positives = 48/56 (85%)
Frame = +1
Query: 22 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFS 189
+V FG+KKTATAVA+CK G G++R+NG+P+ LV P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
Score = 48.8 bits (111), Expect = 8e-05
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 192
+++V G+KK A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 193 VXIRXTVKGGGHVAQVYAIRQLFQR 267
+ T K GG V++VYA+R F +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 82.2 bits (194), Expect = 7e-15
Identities = 49/145 (33%), Positives = 68/145 (46%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 196 XIRXTVKGGGHVAQVYAIRQLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 375
I VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 376 XXXXXXXXXXXXXDTRNLTVKPSRK 450
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIR 204
V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F + +
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 205 XTVKGGGHVAQVYAIRQLFQR 267
V GGGHV+Q+YA+RQ R
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 102 AISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = +3
Query: 216 GWWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 395
G S + + AI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 396 GPGARARYQKSYR 434
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 66.5 bits (155), Expect = 4e-10
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 192
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 193 VXIRXTVKGGGHVAQVYAIRQ 255
+ I V GGG V+Q YA RQ
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQ 89
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 71.3 bits (167), Expect = 1e-11
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIR 204
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 205 XTVKGGGHVAQVYAIRQ 255
KGGG V+Q+YAIRQ
Sbjct: 63 IFSKGGGKVSQIYAIRQ 79
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 210 SQGWWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 389
S+G S + +ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 390 FGGPGARARYQKSYR 434
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/79 (35%), Positives = 52/79 (65%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
++ +Q G++KTA A A + G G +R+NG+P++++ P + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 196 XIRXTVKGGGHVAQVYAIR 252
I V+GGG + Q A R
Sbjct: 61 DIDVKVQGGGFMGQAEAAR 79
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 267 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 434
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPRLLQYKLQEPILLLGKEKFS 189
P+Q+ QVFG KK A +A +G +++V L++ P QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 190 MVXIRXTVKGGGHVAQVYAI 249
V I V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVK 216
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IR V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 217 GGGHVAQVYAIRQLFQR 267
GGG + Q A+R R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +3
Query: 288 KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +3
Query: 252 TAISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 410
T IS+ALI + + + + ++++++ + +D+ L+ D RR EPKKFGGPGAR
Sbjct: 82 TGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGAR 141
Query: 411 ARYQKSYR 434
R QKSYR
Sbjct: 142 RRKQKSYR 149
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 214 KGGGHVAQVYAIR 252
KGGG Q AIR
Sbjct: 66 KGGGINGQAGAIR 78
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVXPRLLQYKLQEPILLLGKEKFSMVXIRXT 210
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E I
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 211 VKGGGHVAQVYAIR 252
V GGG AQ AI+
Sbjct: 69 VLGGGFAAQADAIK 82
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 7 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 99
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 41.9 bits (94), Expect = 0.010
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+KT++A + + G G + +NG PLD R + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 214 KGGGHVAQVYAIR 252
+GGG Q AIR
Sbjct: 71 QGGGDSGQAGAIR 83
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 41.1 bits (92), Expect = 0.017
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+KT+ A G G + VNG P L+ L L++P++ G EK I TV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 214 KGGGHVAQVYAIR 252
KGGG Q A R
Sbjct: 69 KGGGFTGQAGATR 81
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 41.1 bits (92), Expect = 0.017
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILL-LGKEKFSMVX 198
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 199 IRXTVKGGGHVAQVYAIRQLFQR 267
V GGG +Q AI R
Sbjct: 67 --IKVSGGGINSQAEAISLAISR 87
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 38.3 bits (85), Expect = 0.12
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+K A G G + NGR L+ P +L Q ++ P++LLG+E I +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 214 KGGGHVAQVYAIRQLFQR 267
GGG Q A R R
Sbjct: 120 GGGGPTGQAGAFRLAIAR 137
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 37.5 bits (83), Expect = 0.21
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +1
Query: 13 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPR--LLQYKLQEPILLLGKEK 183
P + + GR+KT+ A A K G G + VN + + D + R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 184 FSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
+ + V GGG QV AIR R
Sbjct: 70 YDL---NLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 37.5 bits (83), Expect = 0.21
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQ-YKLQEPILLLGKEK 183
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVN 62
Query: 184 FSMVXIRXTVKGGGHVAQVYAIR 252
+ IR V GGG QV A R
Sbjct: 63 SFDLIIR--VSGGGVQGQVIATR 83
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 37.1 bits (82), Expect = 0.28
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+KTA A K G G L +NG+ L D + + ++ P L E F V + V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 214 KGGGHVAQVYAI 249
GGG Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 37.1 bits (82), Expect = 0.28
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVK 216
G++KT++AV + G G + VNG+ L PR L + L + + TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 217 GGGHVAQVYAI 249
GGG Q A+
Sbjct: 254 GGGVTGQAEAV 264
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 35.9 bits (79), Expect = 0.64
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 35.9 bits (79), Expect = 0.64
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
G++KTA A A K G G ++VNG L P + Q + Q ++ + TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 35.9 bits (79), Expect = 0.64
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 37 GRKKTATAVAYC--KRGHGMLRVNGR-PLDLVXPRLLQYKLQEPILLLG-KEKFSMVXIR 204
GR+K++TA Y + G + +N R P D +L+ +++P+ L K+ F I
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNFD---IN 66
Query: 205 XTVKGGGHVAQVYAIR 252
VKGGG Q AIR
Sbjct: 67 VVVKGGGFTGQAGAIR 82
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 35.9 bits (79), Expect = 0.64
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPR-LLQYKLQEPILLLG-KEKFSMVXIRX 207
GR+KT+ A G+G +NG ++ + + L + +QEP+ L K +F+++
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 208 TVKGGGHVAQVYAIR 252
VKGGG V QV AI+
Sbjct: 77 KVKGGGLVGQVNAIK 91
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 35.5 bits (78), Expect = 0.85
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+K + A + K+G G + VNGR +D + ++ P ++ + + +R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 214 KGGGHVAQVYAI 249
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 35.5 bits (78), Expect = 0.85
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+K + A G G + +NGR LD L+ +++P++ G E +R V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 214 KGGGHVAQVYAIR 252
GGG Q AIR
Sbjct: 68 DGGGFTGQAGAIR 80
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 34.3 bits (75), Expect = 2.0
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILLLGKEKF 186
EP Q GR+K A A G G ++NGR L+ P ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELEGR 102
Query: 187 SMVXIRXTVKGGGHVAQVYAIR 252
V R + GGG Q A+R
Sbjct: 103 YDVIAR--ISGGGVSGQAGALR 122
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPIL-LLGKEKFSMVXIRXTV 213
G++K ++AV G G + VNG+ L+ PRL + + + L + + TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 214 KGGGHVAQVYAI 249
+GGG Q AI
Sbjct: 159 RGGGVTGQAEAI 170
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 33.9 bits (74), Expect = 2.6
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQY--KLQEPILLLGKEKFSMVXIRXT 210
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + ++
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVK-- 74
Query: 211 VKGGGHVAQVYAIR 252
+GGG Q ++R
Sbjct: 75 AEGGGLTGQADSVR 88
>UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S9, putative -
Babesia bovis
Length = 683
Score = 33.1 bits (72), Expect = 4.5
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 10 EPIQAVQVF--GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGK-E 180
EP++ +V+ G +KT+ AV Y + G+G + +N R R ++L+E + L
Sbjct: 550 EPVKFTKVYERGSRKTSVAVVYLEPGNGHIIINDRD-GYQYVRYCTHRLREILEPLDSIY 608
Query: 181 KFSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
+ I V GGG Q AIR R
Sbjct: 609 AYKRFNIVARVNGGGISGQSGAIRHALCR 637
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 33.1 bits (72), Expect = 4.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILL 168
ARR P+ + VF R ++ V K G G+ + G LD P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma
cruzi|Rep: Amastin, putative - Trypanosoma cruzi
Length = 194
Score = 32.3 bits (70), Expect = 7.9
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 88 MLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVKGGGHVAQVYAIRQLFQ 264
+L + G PLD PR + L +P + L K + G + + YA+ +LF+
Sbjct: 18 LLMLTGTPLDQFRPRTNPFFLTDPCVTLWGGKMHCSSTEYVISGNDVIHECYAVLELFR 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,745,183
Number of Sequences: 1657284
Number of extensions: 10633628
Number of successful extensions: 25444
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 24867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25435
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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