Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30382.Seq
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.040
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   0.49 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.6  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   2.6  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   2.6  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   4.6  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   8.0  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   8.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 31.1 bits (67), Expect = 0.040
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +2

Query: 320 RQRSILL*PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGD 499
           R+R   L  R ++R     Q     Q++ Q+ Q+Q  +Q+  Q+  Q+QP  + +  P  
Sbjct: 173 RKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQ 232

Query: 500 QRWS 511
           Q W+
Sbjct: 233 QLWT 236


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = +3

Query: 498  TNGGASTRLQQGSYSRDTPGLP-VTGDSTASGPSTXAHALKQTELPESLPIGPREKPYRL 674
            TNG +S R  Q S +R TP    +     AS PST A A      P      P   P   
Sbjct: 895  TNGSSSGRDSQPSSARSTPKKQNLKFIDEASTPSTSAMAATIVPNPVQASPSPATAPAPA 954

Query: 675  ATWDRDGAN 701
             T   D  N
Sbjct: 955  KTTSTDSTN 963


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 368 PLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQ 466
           P  + L  HQ+ +Q++ +Q  +Q+  Q + Q+Q
Sbjct: 223 PSPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQ 255


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 340 LATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
           LAT    V A + +   AS A S C +++TT++    D   T  S
Sbjct: 15  LATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGRTFCS 59


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 340 LATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
           LAT    V A + +   AS A S C +++TT++    D   T  S
Sbjct: 15  LATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGRTFCS 59


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 392 HQKRSQRAQKQ*LRQRTDQRIHQEQ 466
           HQ+R Q+ Q+Q  +Q+  Q+  Q+Q
Sbjct: 229 HQQREQQQQQQQQQQQQQQQQQQQQ 253


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 317 GRQRSILL*PRTKDRSGPLGQLLSGHQKRSQRAQK 421
           GR+R  +   + KD S P+G +  G Q+  ++ +K
Sbjct: 54  GRRRGRMGGKQPKDYSAPIGFIAGGIQQSGKKPEK 88


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 150 SVHFVNDLCSRHNYKLHLIHIDANY 76
           S H ++D  +R+  +LHL+H D  Y
Sbjct: 120 SEHTLDD--TRYGLELHLVHHDTRY 142


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 421 AITTSTNRSEDTSGTAMSQNCLRSGRPTVERP 516
           A+  + + S DTS T++ +    SG PT+  P
Sbjct: 4   ALGLTRSMSADTSKTSVGKQLPASGIPTLRAP 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,160
Number of Sequences: 2352
Number of extensions: 17085
Number of successful extensions: 55
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)