Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30381.Seq
(841 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 26 0.38
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 24 2.0
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 3.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 4.6
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 6.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 8.1
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 26.2 bits (55), Expect = 0.38
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 510 DQSSARAKTFLSTAQVVDD-QVFAIVSDEKVIKELEAEDEDVVLFKNFEEKRVKY 671
D S + A + AQ+V+ Q I+S+++++ E + D V LFK F++++ Y
Sbjct: 389 DSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADC-DFVVKLFKTFKDRKYLY 442
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.8 bits (49), Expect = 2.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 435 SRGASLLLQPTDDVISLTTT*IVDRTAIPEEFESRVSSYTVALGEILFLSC 283
++G L P + LTT ++ + IP+E S YT + +I C
Sbjct: 270 AKGGKLACPPAIFIFDLTTDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDC 320
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 215 VPEICSGRTMEHRIQLKCTPWL*LQFQS 132
+P++CSG + I L P L L F++
Sbjct: 238 IPQVCSGNCKLNDILLTVRPHLELTFEN 265
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 215 VPEICSGRTMEHRIQLKCTPWL*LQFQS 132
+P++CSG + I L P L L F++
Sbjct: 238 IPQVCSGNCKLNDILLTVRPHLELTFEN 265
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 224 AKAATKLAEEDLLSN*RKLTQLKNRISPRATVYEDTRLS 340
A + K +DLLSN +L + S R TV RLS
Sbjct: 17 ANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLS 55
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -3
Query: 239 LLLPWRIPVPEICSGRTMEHRIQLKCTP 156
L + W P+ EI + R +++C P
Sbjct: 435 LSISWDAPITEIGGDSDLVERYEVRCYP 462
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 22.2 bits (45), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 725 HATIVEFSHETAXRFFG 775
H ++E HE RF+G
Sbjct: 115 HICMLELGHEVCGRFYG 131
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRREL-RC 320
+L + N + R+ R+Q S+ + YQ R+ R E RC
Sbjct: 29 LLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERC 76
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 8.1
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 180 MLHGAATANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRRE 311
+L + + R+ R+Q+S+ + SY+ R+ RRE
Sbjct: 262 LLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRRE 305
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,861
Number of Sequences: 438
Number of extensions: 4012
Number of successful extensions: 40
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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