Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30377.Seq
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    28   0.29 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.6  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            24   3.6  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            24   3.6  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   3.6  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   3.6  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   3.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.3  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 174 VQSIGNLTEGSLLIREDRQSC 236
           ++ +G  T G ++IRED QSC
Sbjct: 849 MKDVGEKTTGPIVIREDNQSC 869


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 499  HGRGGTNSISNEFL 540
            HGR GT SI N+F+
Sbjct: 2347 HGREGTKSIFNDFI 2360


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 416 SXXXITFGQSFDVCXRNYITE 354
           S   +T GQ+FD+  R Y+++
Sbjct: 135 SDITLTIGQAFDLAYRRYVSD 155


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 416 SXXXITFGQSFDVCXRNYITE 354
           S   +T GQ+FD+  R Y+++
Sbjct: 135 SDITLTIGQAFDLAYRRYVSD 155


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 416 SXXXITFGQSFDVCXRNYITE 354
           S   +T GQ+FD+  R Y+++
Sbjct: 135 SDITLTIGQAFDLAYRRYVSD 155


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 416 SXXXITFGQSFDVCXRNYITE 354
           S   +T GQ+FD+  R Y+++
Sbjct: 135 SDITLTIGQAFDLAYRRYVSD 155


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 416 SXXXITFGQSFDVCXRNYITE 354
           S   +T GQ+FD+  R Y+++
Sbjct: 135 SDITLTIGQAFDLAYRRYVSD 155


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 370 ETTLLKYIK*TPYLGSLSSRDNRAMFSD 287
           +TTL+ Y     Y+GSL    N  + SD
Sbjct: 836 QTTLMSYSSNNDYIGSLVQVKNALVSSD 863


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,178
Number of Sequences: 2352
Number of extensions: 10749
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)