Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30375.Seq
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 126 4e-28
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 98 1e-19
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 85 7e-16
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 85 7e-16
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 85 9e-16
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 83 3e-15
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 83 5e-15
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 79 8e-14
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 77 2e-13
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 76 4e-13
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 76 6e-13
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 73 5e-12
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 72 7e-12
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 69 6e-11
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 68 1e-10
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 67 2e-10
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 66 5e-10
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 62 7e-09
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 46 4e-04
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 46 7e-04
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 45 0.001
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 44 0.003
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 44 0.003
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 43 0.004
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 43 0.005
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 42 0.008
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 42 0.008
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 41 0.015
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 41 0.020
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 40 0.026
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 40 0.026
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 40 0.034
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 39 0.060
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 39 0.079
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 37 0.32
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 37 0.32
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 36 0.42
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 36 0.56
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 36 0.56
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 36 0.56
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 36 0.73
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 35 1.3
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 34 1.7
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 33 3.0
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 33 3.0
UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Re... 33 3.9
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 33 5.2
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 33 5.2
UniRef50_A6LS35 Cluster: SMC domain protein; n=1; Clostridium be... 32 9.0
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 32 9.0
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 32 9.0
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 126 bits (303), Expect = 4e-28
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 9e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +1
Query: 13 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 192
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+K+LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 193 APPNEKPEIVKTHLXXMIIVP 255
APP EKPE+VKTHL MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 97.9 bits (233), Expect = 1e-19
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+HGR GAT +SRFIPLK
Sbjct: 88 EMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGR--AGAT-TSRFIPLK 142
Score = 79.4 bits (187), Expect = 5e-14
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +1
Query: 16 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 195
KKR+F+ +YRGVDL++LL+M E ++L G+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 196 PPNEKPEIVKTHLXXMIIVP 255
P NEKP V+TH+ MIIVP
Sbjct: 68 PENEKPAPVRTHMRNMIIVP 87
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 85.4 bits (202), Expect = 7e-16
Identities = 34/57 (59%), Positives = 47/57 (82%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGATHSSRFIPL+
Sbjct: 95 MINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGATHSSRFIPLR 151
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 85.4 bits (202), Expect = 7e-16
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 195
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 196 PPNE--KPEIVKTHLXXMIIVP 255
KPE+VKTHL MIIVP
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVP 98
Score = 79.0 bits (186), Expect = 6e-14
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA----THSSRFIP 422
EM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T K V H RP I S+RFIP
Sbjct: 99 EMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIP 158
Query: 423 LK 428
L+
Sbjct: 159 LR 160
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 85.0 bits (201), Expect = 9e-16
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
VG IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH PG+GAT SS+F+PLK
Sbjct: 96 VGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
Score = 31.9 bits (69), Expect = 9.0
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +1
Query: 31 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 210
++FTY+G L+ L M E+L++++ L R+P KKL K E+
Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKIL----PARARRTLLREPNYEQKKLME-KLES----D 78
Query: 211 PEIVKTHLXXMIIVPRW 261
E VKTH+ +II+P +
Sbjct: 79 EEDVKTHVRDVIILPNY 95
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 83.4 bits (197), Expect = 3e-15
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Frame = +1
Query: 13 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKPMALVKKL 174
+KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK +L+K+L
Sbjct: 20 QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRL 79
Query: 175 RRAKKEAPPNEKPEIVKTHLXXMIIVP 255
R+AKK APP EKPE+VKTH ++++P
Sbjct: 80 RKAKKGAPPTEKPEVVKTHPRDVLLLP 106
Score = 34.7 bits (76), Expect = 1.3
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEI 314
MVGS VG+Y+GKTF QVE+
Sbjct: 108 MVGSTVGVYDGKTFKQVEM 126
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 82.6 bits (195), Expect = 5e-15
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 T*TNGIGQE----AASRQERGSSE*EARDREDSLXXHDHRSEMVGSIVGIYNGKTFNQVE 311
T T G+ +E A +E G+ E L E VG +Y G+ F +VE
Sbjct: 42 TITRGLSEEHHKVLAEARESGTEETANNPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVE 101
Query: 312 IKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
++PEMIGHYLGEF +T V+HG+ GIGAT SS+F+PLK
Sbjct: 102 VQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +1
Query: 34 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 213
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 214 EIVKTHLXXMIIVPRW 261
++THL M ++P +
Sbjct: 71 --IRTHLRDMPVLPEF 84
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 78.6 bits (185), Expect = 8e-14
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS F+ +K
Sbjct: 82 EMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = +1
Query: 28 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNE 207
++KF YRG LD+LL+MP ++ ++L+ G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GK 65
Query: 208 KPEIVKTHLXXMIIVP 255
+ +KTH+ MII+P
Sbjct: 66 YSKTIKTHVRDMIILP 81
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 77.4 bits (182), Expect = 2e-13
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EM+G V +YNG+ F VEIKP M+G L E+S++YK V HG+ GIGAT SS+F+PL+
Sbjct: 88 EMIGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFVPLR 145
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 KKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 192
++R + +RGV++++L M + L +L GL K + V KLR ++
Sbjct: 8 RRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR-LRRA 66
Query: 193 APPNEKPEIVKTHLXXMIIVP 255
A P++KP+IV+THL MII P
Sbjct: 67 AQPSQKPKIVRTHLRDMIIFP 87
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 76.2 bits (179), Expect = 4e-13
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
MVG V +YNGK + V+IKPEMIGHYLGEFS T K KH PGIGAT SS + K
Sbjct: 84 MVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 75.8 bits (178), Expect = 6e-13
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+GAT SS+F+PLK
Sbjct: 79 EMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKFVPLK 136
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 72.5 bits (170), Expect = 5e-12
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EMVG +G+++G+ F VEI PEMIGH LGE++ T + V H PG+GAT SS+ + LK
Sbjct: 116 EMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSKHVALK 173
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 72.1 bits (169), Expect = 7e-12
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
M+G++VG++ G + VEIKPEM+G L +F+ T KHGRPGIGA+ SS+F+PLK
Sbjct: 93 MIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVPLK 149
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 HETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRR 180
+E KKKR FR++TYRGV +++L MP ++ +L GL + + L+K
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIA 65
Query: 181 AKKE-APPNEKPEIVKTHLXXMIIVP 255
AK + KPE+V+TH II P
Sbjct: 66 AKAACVSSSSKPEMVRTHARSAIIWP 91
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 68.9 bits (161), Expect = 6e-11
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EM+G GIYNGK F ++++ E +G +LGE + T V+HG PG+GAT S F+P+K
Sbjct: 104 EMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPIK 161
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +1
Query: 34 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 213
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 214 EIVKTHLXXMIIVP 255
+++TH +I P
Sbjct: 90 RVIRTHCRDFVITP 103
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 68.1 bits (159), Expect = 1e-10
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
E V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH + G+GAT SS LK
Sbjct: 87 EFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSSSATSLK 144
Score = 49.2 bits (112), Expect = 6e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 31 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPN 204
R +TYRG LD L M + +EL+ K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 205 EKPEIVKTHLXXMIIVPRW 261
+P +VKTHL M+I+P +
Sbjct: 70 VRPPVVKTHLRHMVILPEF 88
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 67.3 bits (157), Expect = 2e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 389
E+VG IVG+YNGK F VE+K +MIG YL EF++TYKP HG+ G
Sbjct: 93 ELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
Score = 49.6 bits (113), Expect = 4e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 19 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVKK 171
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 172 LRRAKKEAPPNEKPEIVKTHLXXMIIVP 255
+RR+K++ P EKP VKTH MI++P
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIP 92
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 66.1 bits (154), Expect = 5e-10
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 428
EMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS I K
Sbjct: 101 EMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
Score = 49.2 bits (112), Expect = 6e-05
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +1
Query: 37 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 216
F YRG L++LL+M ++ ++L+ GLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 217 IVKTHLXXMIIVP 255
+++TH MII+P
Sbjct: 88 VIRTHCRDMIILP 100
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 62.1 bits (144), Expect = 7e-09
Identities = 36/58 (62%), Positives = 36/58 (62%)
Frame = -2
Query: 430 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTI 257
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT EPTI
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTI 65
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 46.4 bits (105), Expect = 4e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVK 374
+ VG+IV +YNGK F ++I EM+GH GEF+ T K K
Sbjct: 61 QFVGNIVSVYNGKNFVNLKITDEMVGHKYGEFASTRKIAK 100
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 45.6 bits (103), Expect = 7e-04
Identities = 22/34 (64%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGEFS 353
EM+G IVG+YNGKT NQV I KP+ I HYL S
Sbjct: 39 EMIGYIVGVYNGKTLNQVGILKPKKICHYLTSLS 72
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 252 SEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
S+ V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 101 SDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 49 VGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
EMV + +YNGKTF + I +++GH LGEFS T
Sbjct: 43 EMVSLTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 36 KMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
E VG + ++NGKTF V I +M+GH LGEF+ T
Sbjct: 168 EFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 41.9 bits (94), Expect = 0.008
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
VG + IYNGK +IKPEM+GH LGEF T K
Sbjct: 40 VGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 41.9 bits (94), Expect = 0.008
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 380
EMVG + ++NGK V + M+GH LGEF+VT HG
Sbjct: 41 EMVGITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 41.1 bits (92), Expect = 0.015
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
E V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 168 EYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 40.7 bits (91), Expect = 0.020
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 63 MVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 40.3 bits (90), Expect = 0.026
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 377
+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 38 KFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 40.3 bits (90), Expect = 0.026
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 35 QFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 39.9 bits (89), Expect = 0.034
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 377
+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 83 DFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 39.1 bits (87), Expect = 0.060
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 353
VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 24 VGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 38.7 bits (86), Expect = 0.079
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 45 QFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 37.5 bits (83), Expect = 0.18
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 353
VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 92 VGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 36.7 bits (81), Expect = 0.32
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
M+G I+ ++NG+ V I EM+G LGEF+ T
Sbjct: 61 MIGEIIAVHNGREHIPVYITEEMVGFKLGEFATT 94
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 36.7 bits (81), Expect = 0.32
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
+M+G + ++NGK + I EM+GH LGEF T
Sbjct: 43 DMIGMTISVHNGKQHIPIFIGDEMVGHKLGEFVPT 77
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 36.3 bits (80), Expect = 0.42
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 273 VGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
V IYNG F ++I MIGH GEFS+T
Sbjct: 42 VKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 35.9 bits (79), Expect = 0.56
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 377
+ VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 44 QFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 35.9 bits (79), Expect = 0.56
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
M+G + ++NG+ V + EM+GH LGEF+ T
Sbjct: 44 MIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPT 77
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 35.9 bits (79), Expect = 0.56
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
VG + +YNG+ V I M+GH LGEFS T
Sbjct: 45 VGHKIAVYNGREHIPVYITENMVGHKLGEFSPT 77
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 35.5 bits (78), Expect = 0.73
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
+M+G +G+++G+ V + M+GH LGEF+ T
Sbjct: 43 DMIGHTIGVHDGRKHVPVFVTESMVGHKLGEFAPT 77
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 34.7 bits (76), Expect = 1.3
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
M+G + I+NG+ V I M+GH LGEFS T
Sbjct: 44 MIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPT 77
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 34.3 bits (75), Expect = 1.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
+G + +Y+G+ V I+ +M+GH LGEF+ T
Sbjct: 45 IGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPT 77
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPE-MIGHYLGEFSVTYKPVKH 377
+G +YNGK + V + + MIGH GEFS T K H
Sbjct: 46 LGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGH 85
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 33.5 bits (73), Expect = 3.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 261 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
VG ++NGKT+ V I +M+G LGE+ T K
Sbjct: 45 VGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTRK 79
>UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Rep:
AAA ATPase - Bacillus sp. B14905
Length = 569
Score = 33.1 bits (72), Expect = 3.9
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 267 SIVGIYNGKT-----FNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFI 419
S+VG+ N K N ++I+ + H L F +TY V G PG G T +R I
Sbjct: 302 SLVGLPNAKKELHNLINFIKIQSLRVDHGLTSFPITYHLVFFGNPGTGKTTVARII 357
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 279 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
I+NGK F + + E IGH GEF+ T K
Sbjct: 43 IFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
MVG + +YNGK + I +MI LGEFS T
Sbjct: 44 MVGHNISVYNGKNYVPFLILNQMISSKLGEFSRT 77
>UniRef50_A6LS35 Cluster: SMC domain protein; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: SMC domain protein -
Clostridium beijerinckii NCIMB 8052
Length = 1163
Score = 31.9 bits (69), Expect = 9.0
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +3
Query: 207 EARDREDSLXXHDHRSEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRP 386
E +D D +H+ ++G + ++ GK F + + + + E S K + HG
Sbjct: 980 EQKDLLDKKMKLEHKLALLGDLEKLFKGKKFVEF-VAVSKLKYVSVEASKRLKEITHGNY 1038
Query: 387 GIGATHSSRFI 419
G+ +SRFI
Sbjct: 1039 GLEVDDNSRFI 1049
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 273 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
VG+++G TF ++ M+G+ LGEF T + ++G+
Sbjct: 47 VGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYGK 83
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 258 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 71 MIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,969,968
Number of Sequences: 1657284
Number of extensions: 7593201
Number of successful extensions: 16952
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 16552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16939
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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