Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30371.Seq
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.35 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.35 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    28   0.35 
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   3.2  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 201 VDDIGDVTVTNDGATILKCWK 263
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 201 VDDIGDVTVTNDGATILKCWK 263
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 201 VDDIGDVTVTNDGATILKCWK 263
           +DD  + T+TND AT+++ WK
Sbjct: 12  MDDALNTTLTNDKATLIQVWK 32


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = -2

Query: 227 DCNIPNIVNQHLIQT--NWP--KGALYYVCYSRCCHYIL 123
           D N+P++  +++     +WP   G +YY  ++ C  Y+L
Sbjct: 186 DVNLPSLGIEYVSYCIEDWPIAYGRVYYSAFTLCVQYVL 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,040
Number of Sequences: 2352
Number of extensions: 13143
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)