Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30371.Seq
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 157 6e-39
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 157 6e-39
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 86 3e-17
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 86 3e-17
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 86 3e-17
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 82 5e-16
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 77 1e-14
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 73 3e-13
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 73 3e-13
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 70 2e-12
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 65 4e-11
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 58 9e-09
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 58 9e-09
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 33 0.21
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 1.1
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 2.6
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 29 2.6
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 28 6.0
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 28 6.0
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 157 bits (382), Expect = 6e-39
Identities = 88/160 (55%), Positives = 108/160 (67%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 428 RLACKEAVKYIQDNLTVTVESLGRAVSIQHRPKQPMXSKLIGADAGFLLGDGCRCCXGNS 607
RLACKEAVKYI +N++ T +S+GR S+ + K M SK+IG DA F G+ +
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQ-SVVNAAKTSMSSKIIGPDADF-FGE---LVVDAA 180
Query: 608 XPMNPRGNTXIPYPXXLNTSXKPTGRSCQGKXXLSKAMAL 727
+ N + YP K G+S + + L K AL
Sbjct: 181 EAVRVENNGKVTYPINAVNVLKAHGKSAR-ESVLVKGYAL 219
Score = 83.8 bits (198), Expect = 1e-16
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +3
Query: 78 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 157 bits (382), Expect = 6e-39
Identities = 88/160 (55%), Positives = 108/160 (67%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 428 RLACKEAVKYIQDNLTVTVESLGRAVSIQHRPKQPMXSKLIGADAGFLLGDGCRCCXGNS 607
RLACKEAVKYI +N++ T +S+GR S+ + K M SK+IG DA F G+ +
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQ-SVVNAAKTSMSSKIIGPDADF-FGE---LVVDAA 180
Query: 608 XPMNPRGNTXIPYPXXLNTSXKPTGRSCQGKXXLSKAMAL 727
+ N + YP K G+S + + L K AL
Sbjct: 181 EAVRVENNGKVTYPINAVNVLKAHGKSAR-ESVLVKGYAL 219
Score = 83.8 bits (198), Expect = 1e-16
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +3
Query: 78 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 428 RLA 436
R A
Sbjct: 128 RRA 130
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 105 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILK 254
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 428 RLA 436
R A
Sbjct: 128 RRA 130
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 105 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILK 254
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 428 RLA 436
R A
Sbjct: 128 RRA 130
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 105 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILK 254
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 81.8 bits (193), Expect = 5e-16
Identities = 34/80 (42%), Positives = 58/80 (72%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
++ + V+HPAAK ++E+A+ QDEE GDGTTSV+I+A E++ +A ++ K HPT II Y
Sbjct: 69 LREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAY 128
Query: 428 RLACKEAVKYIQDNLTVTVE 487
R A ++ +++ ++ + TV+
Sbjct: 129 RQALEDMIQWSENKFSKTVD 148
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 78 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
LS R G V+ N+ +++++SLGP + KML+D +G + +TNDG IL+
Sbjct: 12 LSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILR 70
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 428 RLACKEAVK 454
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +3
Query: 153 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
N +++SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 428 RLACKEAVK 454
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +3
Query: 153 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
N +++SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 428 RLACKEAVK 454
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +3
Query: 153 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
N +++SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K+L++ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 428 RLACKEAVKYIQD 466
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +3
Query: 159 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
++++LGP GLDK++VD G T++NDGATILK
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILK 67
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K+L++ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 428 RLACKEAVKYIQD 466
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +3
Query: 159 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
++++LGP GLDK++VD G T++NDGATILK
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILK 67
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+ + V HP AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 428 RLACKEAVKYIQD 466
+ A EA K + +
Sbjct: 137 QSAAAEAEKILDE 149
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +3
Query: 108 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 251
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+ + V HP AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 428 RLACKEAVKYIQD 466
+ A EA K + +
Sbjct: 137 QSAAAEAEKILDE 149
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +3
Query: 108 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 251
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/71 (35%), Positives = 51/71 (71%)
Frame = +2
Query: 248 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+K LE++HPAA++++ ++Q++++GD T +VVI+AA LL++A L+ + P + +GY
Sbjct: 72 LKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGY 131
Query: 428 RLACKEAVKYI 460
A ++A++ +
Sbjct: 132 EQAAEKALEIL 142
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 108 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 254
D +N+ + ++S+ GP G++KM+++ I + VTND ATILK
Sbjct: 25 DEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILK 73
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 57.6 bits (133), Expect = 9e-09
Identities = 23/69 (33%), Positives = 42/69 (60%)
Frame = +2
Query: 257 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 436
+ ++HP A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+ A
Sbjct: 67 MAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWA 126
Query: 437 CKEAVKYIQ 463
+ ++ ++
Sbjct: 127 NTKTLELLE 135
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 126 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 251
N+ ++++S+LGP G KMLV GD+ +T DG +L
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 57.6 bits (133), Expect = 9e-09
Identities = 23/69 (33%), Positives = 42/69 (60%)
Frame = +2
Query: 257 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 436
+ ++HP A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+ A
Sbjct: 67 MAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWA 126
Query: 437 CKEAVKYIQ 463
+ ++ ++
Sbjct: 127 NTKTLELLE 135
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 126 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 251
N+ ++++S+LGP G KMLV GD+ +T DG +L
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV-- 451
AK++ ++A +EE GDGTT ++A + K E ++ + I G A + V
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVVAE 145
Query: 452 -KYIQDNLTVTVESLGRAVSI 511
K I +T T E + + +I
Sbjct: 146 LKKISKKVT-TPEEIAQVATI 165
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV-- 451
AK++ ++A +EE GDGTT ++ + K E ++ + I G A + V
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRGVMNAVEVVVAE 145
Query: 452 -KYIQDNLTVTVESLGRAVSI 511
K I +T T E + + +I
Sbjct: 146 LKKISKKVT-TPEEIAQVATI 165
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 451
P A +A +E+GDG V ++A+E+ N E+ KT++ S L KE
Sbjct: 90 PPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEVLMRSFRRAIGLRVKETK 147
Query: 452 KYIQDNLT 475
+ +T
Sbjct: 148 DVYEGEVT 155
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/96 (23%), Positives = 46/96 (47%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 451
P A+++ E +++++ T V+ ++ L K ADE+V+ +I T + C
Sbjct: 338 PYARMISENLGKENDKM-QTLTETVVESSGLEKGADEMVRNEIINTVFNAAEEDPCTSNS 396
Query: 452 KYIQDNLTVTVESLGRAVSIQHRPKQPMXSKLIGAD 559
D ++ESLG + + P +P+ ++ AD
Sbjct: 397 LEKYDKYRPSLESLGIKRTSEPEP-EPVPHPIVNAD 431
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 245 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYIL 123
CG V C+I IVN +L++ W G L Y+ S Y+L
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 245 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYIL 123
CG V C+I IVN +L++ W G L Y+ S Y+L
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,450,174
Number of Sequences: 27780
Number of extensions: 297640
Number of successful extensions: 692
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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