Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30370.Seq
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein. 95 2e-19
BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 3... 95 2e-19
AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein. 95 2e-19
AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens ... 95 2e-19
AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens ... 95 2e-19
BC075825-1|AAH75825.1| 661|Homo sapiens ALS2CL protein protein. 34 0.62
BC061883-1|AAH61883.1| 661|Homo sapiens ALS2CL protein protein. 34 0.62
BC042906-1|AAH42906.1| 661|Homo sapiens ALS2CL protein protein. 34 0.62
AK131273-1|BAD18450.1| 705|Homo sapiens protein ( Homo sapiens ... 34 0.62
AK131270-1|BAD18448.1| 953|Homo sapiens protein ( Homo sapiens ... 34 0.62
AK093844-1|BAC04237.1| 468|Homo sapiens protein ( Homo sapiens ... 34 0.62
AK092455-1|BAC03895.1| 300|Homo sapiens protein ( Homo sapiens ... 34 0.62
AB107015-1|BAD51817.1| 953|Homo sapiens ALS2 C-terminal like pr... 34 0.62
BC019096-1|AAH19096.1| 323|Homo sapiens coiled-coil domain cont... 32 2.5
BC000561-1|AAH00561.1| 323|Homo sapiens coiled-coil domain cont... 32 2.5
AK001236-1|BAA91572.1| 323|Homo sapiens protein ( Homo sapiens ... 32 2.5
AF091080-1|AAC72949.1| 316|Homo sapiens unknown protein. 32 2.5
BC109233-1|AAI09234.1| 190|Homo sapiens ALS2CL protein protein. 30 7.6
AK126505-1|BAC86572.1| 205|Homo sapiens protein ( Homo sapiens ... 30 7.6
>CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein.
Length = 247
Score = 95.5 bits (227), Expect = 2e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +1
Query: 247 QSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 426
+++LANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P + + P
Sbjct: 57 RALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFP 114
Query: 427 IFLFALLHAASYSLTILDTLGQN 495
+ LF+LLHAA+Y+ +LD G N
Sbjct: 115 VLLFSLLHAATYTKKVLDARGSN 137
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 95 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFYK 250
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PL + ++FY+
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQ 56
>BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 33
protein.
Length = 247
Score = 95.5 bits (227), Expect = 2e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +1
Query: 247 QSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 426
+++LANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P + + P
Sbjct: 57 RALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFP 114
Query: 427 IFLFALLHAASYSLTILDTLGQN 495
+ LF+LLHAA+Y+ +LD G N
Sbjct: 115 VLLFSLLHAATYTKKVLDARGSN 137
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 95 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFYK 250
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PL + ++FY+
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQ 56
>AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein.
Length = 247
Score = 95.5 bits (227), Expect = 2e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +1
Query: 247 QSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 426
+++LANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P + + P
Sbjct: 57 RALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFP 114
Query: 427 IFLFALLHAASYSLTILDTLGQN 495
+ LF+LLHAA+Y+ +LD G N
Sbjct: 115 VLLFSLLHAATYTKKVLDARGSN 137
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 95 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFYK 250
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PL + ++FY+
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQ 56
>AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13000 fis, clone NT2RP3000333, highly similar to
Rattus norvegicus db83 mRNA. ).
Length = 247
Score = 95.5 bits (227), Expect = 2e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +1
Query: 247 QSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 426
+++LANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P + + P
Sbjct: 57 RALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFP 114
Query: 427 IFLFALLHAASYSLTILDTLGQN 495
+ LF+LLHAA+Y+ +LD G N
Sbjct: 115 VLLFSLLHAATYTKKVLDARGSN 137
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 95 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFYK 250
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PL + ++FY+
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQ 56
>AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ10525 fis, clone NT2RP2000892. ).
Length = 247
Score = 95.5 bits (227), Expect = 2e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +1
Query: 247 QSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 426
+++LANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P + + P
Sbjct: 57 RALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFP 114
Query: 427 IFLFALLHAASYSLTILDTLGQN 495
+ LF+LLHAA+Y+ +LD G N
Sbjct: 115 VLLFSLLHAATYTKKVLDARGSN 137
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 95 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFYK 250
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PL + ++FY+
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQ 56
>BC075825-1|AAH75825.1| 661|Homo sapiens ALS2CL protein protein.
Length = 661
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 510 LLEFLDVQKHLW 521
>BC061883-1|AAH61883.1| 661|Homo sapiens ALS2CL protein protein.
Length = 661
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 510 LLEFLDVQKHLW 521
>BC042906-1|AAH42906.1| 661|Homo sapiens ALS2CL protein protein.
Length = 661
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 510 LLEFLDVQKHLW 521
>AK131273-1|BAD18450.1| 705|Homo sapiens protein ( Homo sapiens
cDNA FLJ16212 fis, clone CTONG2024031. ).
Length = 705
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 543 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 602
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 603 LLEFLDVQKHLW 614
>AK131270-1|BAD18448.1| 953|Homo sapiens protein ( Homo sapiens
cDNA FLJ16208 fis, clone CTONG2020374. ).
Length = 953
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 742 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 801
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 802 LLEFLDVQKHLW 813
>AK093844-1|BAC04237.1| 468|Homo sapiens protein ( Homo sapiens
cDNA FLJ36525 fis, clone TRACH2002988. ).
Length = 468
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 257 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 316
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 317 LLEFLDVQKHLW 328
>AK092455-1|BAC03895.1| 300|Homo sapiens protein ( Homo sapiens
cDNA FLJ35136 fis, clone PLACE6009338. ).
Length = 300
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 89 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 148
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 149 LLEFLDVQKHLW 160
>AB107015-1|BAD51817.1| 953|Homo sapiens ALS2 C-terminal like
protein.
Length = 953
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 452
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 742 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 801
Query: 453 RFVFLDYP*YSW 488
FLD + W
Sbjct: 802 LLEFLDVQKHLW 813
>BC019096-1|AAH19096.1| 323|Homo sapiens coiled-coil domain
containing 94 protein.
Length = 323
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 589 TATISRAPRPRRMFRDWELGPGXMSRRPP 503
TA + AP+P+R WE G + RPP
Sbjct: 231 TAILDEAPKPKRKVEVWEQSVGSLGSRPP 259
>BC000561-1|AAH00561.1| 323|Homo sapiens coiled-coil domain
containing 94 protein.
Length = 323
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 589 TATISRAPRPRRMFRDWELGPGXMSRRPP 503
TA + AP+P+R WE G + RPP
Sbjct: 231 TAILDEAPKPKRKVEVWEQSVGSLGSRPP 259
>AK001236-1|BAA91572.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ10374 fis, clone NT2RM2001936, weakly similar to
32.3 KD PROTEIN IN CWP1-MBR1 INTERGENIC REGION. ).
Length = 323
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 589 TATISRAPRPRRMFRDWELGPGXMSRRPP 503
TA + AP+P+R WE G + RPP
Sbjct: 231 TAILDEAPKPKRKVEVWEQSVGSLGSRPP 259
>AF091080-1|AAC72949.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 589 TATISRAPRPRRMFRDWELGPGXMSRRPP 503
TA + AP+P+R WE G + RPP
Sbjct: 231 TAILDEAPKPKRKVEVWEQSVGSLGSRPP 259
>BC109233-1|AAI09234.1| 190|Homo sapiens ALS2CL protein protein.
Length = 190
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 342 VLPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATRRFVFLDYP*YSW 488
+LP LF L+ HER F + G ANL + T+ FLD + W
Sbjct: 1 MLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQLLEFLDVQKHLW 50
>AK126505-1|BAC86572.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ44541 fis, clone UTERU3005460. ).
Length = 205
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 342 VLPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATRRFVFLDYP*YSW 488
+LP LF L+ HER F + G ANL + T+ FLD + W
Sbjct: 1 MLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQLLEFLDVQKHLW 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,970,867
Number of Sequences: 237096
Number of extensions: 2466772
Number of successful extensions: 6745
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6740
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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