Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30370.Seq
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 25 0.56
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 24 1.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 7.0
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.0
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 22 7.0
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 22 7.0
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.2
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 9.2
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 367 YLFYSLIFMNVVPNLLILVPIF 432
+LF LIF++V N+L+ V I+
Sbjct: 30 FLFLILIFLSVAGNILVCVAIY 51
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 61 NQYGRSKSASRRH-WSTKRHPSLESSHHCQ*NRRSSLGGPRNHRAVYH 201
N+ S + RRH + PS E + SSL RNH+++YH
Sbjct: 9 NKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 271 SQRSRVRFVECRHWIVKQWEHVSNGTQHGDYADP 170
S RS+ F+ H W + HGD+ DP
Sbjct: 125 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDP 158
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 271 SQRSRVRFVECRHWIVKQWEHVSNGTQHGDYADP 170
S RS+ F+ H W + HGD+ DP
Sbjct: 125 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDP 158
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 271 SQRSRVRFVECRHWIVKQWEHVSNGTQHGDYADP 170
S RS+ F+ H W + HGD+ DP
Sbjct: 176 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDP 209
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 271 SQRSRVRFVECRHWIVKQWEHVSNGTQHGDYADP 170
S RS+ F+ H W + HGD+ DP
Sbjct: 125 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDP 158
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 283 RLHQRIPAREISLSR 327
RLH R+P R +L R
Sbjct: 108 RLHSRLPGRNFNLLR 122
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 528 GPSSQSRNILRGRGAREIVAVSRSXSSWH 614
G S N+L A+++V+V++S + W+
Sbjct: 672 GSWSNRPNLLFKDEAKDLVSVNKSWNKWN 700
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 528 GPSSQSRNILRGRGAREIVAVSRSXSSWH 614
G S N+L A+++V+V++S + W+
Sbjct: 672 GSWSNRPNLLFKDEAKDLVSVNKSWNKWN 700
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 528 GPSSQSRNILRGRGAREIVAVSRSXSSWH 614
G S N+L A+++V+V++S + W+
Sbjct: 672 GSWSNRPNLLFKDEAKDLVSVNKSWNKWN 700
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 369 IVSAVLQEEPRHEIPREGD 313
+V+ VLQ P E+ + GD
Sbjct: 26 LVNTVLQPRPSFELSKNGD 44
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 369 IVSAVLQEEPRHEIPREGD 313
+V+ VLQ P E+ + GD
Sbjct: 28 LVNTVLQPRPSFELSKNGD 46
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 330 FHGEVLPGGQRSLFILFTHFHERRAQF 410
F +L SLF++ HF R +F
Sbjct: 278 FVNNILAASACSLFVVIFHFAHPREEF 304
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -3
Query: 151 FIGNDVSFQGWDAFWWTSVACLLI 80
F ND+ +QG WT + I
Sbjct: 285 FQANDIQYQGASDILWTQASAKAI 308
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,691
Number of Sequences: 438
Number of extensions: 4342
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -