Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30368.Seq
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   1.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   4.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   4.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   4.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   5.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 483 YCYCIWFLLDQSSAR 527
           Y  CIW+ LD+ SA+
Sbjct: 292 YVMCIWYWLDRESAK 306


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 483 YCYCIWFLLDQSSAR 527
           Y  CIW+ LD+ SA+
Sbjct: 292 YVMCIWYWLDRESAK 306


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +3

Query: 591 EKVIKELEAEDEDVVAFQELSKRNVSNMKMKKSLE---DLLNAWVFVQSMLLIVEFSHEN 761
           +K IKE   EDE++   + +  RN  ++  ++  E    L N W   +  L +  FS E 
Sbjct: 266 KKTIKEKYTEDEELNKTKPIWTRNADDISQEEYGEFYKSLTNDW---EDHLAVKHFSVEG 322

Query: 762 VPRF 773
              F
Sbjct: 323 QLEF 326


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 259 EIFFSQLCCCLGVFRC 212
           E+F S L CC  +F C
Sbjct: 93  EVFSSLLSCCSVIFGC 108


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 259 EIFFSQLCCCLGVFRC 212
           E+F S L CC  +F C
Sbjct: 93  EVFSSLLSCCSVIFGC 108


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 456 TG*RTYRCQYC 488
           TG R YRC++C
Sbjct: 33  TGERPYRCEHC 43


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 456 TG*RTYRCQYC 488
           TG R YRC++C
Sbjct: 186 TGERPYRCEHC 196


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 451  AEQAKELIDANTVIVFGFFWTRA 519
            A  AKELI+     VF FF   A
Sbjct: 1255 ARIAKELIELRNKSVFAFFMFNA 1277


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 451  AEQAKELIDANTVIVFGFFWTRA 519
            A  AKELI+     VF FF   A
Sbjct: 1255 ARIAKELIELRNKSVFAFFMFNA 1277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,196
Number of Sequences: 336
Number of extensions: 3815
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)