Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30367.Seq
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   6.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   6.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   6.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.9  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 210 ILILGLDGAGKTTIL 254
           + ILG  GAGKTT+L
Sbjct: 107 LAILGSSGAGKTTLL 121


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 210 ILILGLDGAGKTTIL 254
           + ILG  GAGKTT+L
Sbjct: 107 LAILGSSGAGKTTLL 121


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFNVQTK 102
           CA C +K+KE I K+ +   K
Sbjct: 70  CAKCNDKHKEGIRKVIHYLVK 90


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 391 TSPIRPNTGLSPKIPHL 341
           T  I P+ GLSP  PHL
Sbjct: 227 TGLIPPHPGLSPHPPHL 243


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 391 TSPIRPNTGLSPKIPHL 341
           T  I P+ GLSP  PHL
Sbjct: 119 TGLIPPHPGLSPHPPHL 135


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFN 90
           CA C  K+KE + K+ +
Sbjct: 72  CAKCNEKHKEGVRKVIH 88


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFN 90
           CA C  K+KE + K+ +
Sbjct: 72  CAKCNEKHKEGVRKVLH 88


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFN 90
           CA C  K+KE + K+ +
Sbjct: 72  CAKCNEKHKEGVRKVIH 88


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 40  CAPCVNKYKETISKI 84
           CA C  K+KE + K+
Sbjct: 71  CAKCNEKHKEGVRKV 85


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 318 TCSTLNPIVGIVVTTSPTCNL*ELSSFRHRPIQVSKSAFP 199
           T ST + +       SPT N   L+S    P Q+S    P
Sbjct: 303 TYSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTP 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,816
Number of Sequences: 336
Number of extensions: 4182
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)