Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30365.Seq
(513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 134 1e-30
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 128 1e-28
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 116 3e-25
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 116 3e-25
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 115 7e-25
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 110 2e-23
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 5e-16
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 81 1e-14
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 74 2e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 70 4e-11
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 69 8e-11
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 64 1e-09
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 64 2e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 60 3e-08
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 55 8e-07
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 54 2e-06
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.044
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 39 0.077
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 38 0.13
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 33 3.8
UniRef50_Q0VQ79 Cluster: Membrane-bound lytic murein transglycos... 32 6.7
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 32 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 134 bits (323), Expect = 1e-30
Identities = 63/73 (86%), Positives = 66/73 (90%)
Frame = -3
Query: 472 MVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGK 293
MVRM VL ALKSI+NAEKRGKRQ I PCSKV V+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 292 IVVNLTGRLNKCG 254
IVVNLTGRLNKCG
Sbjct: 61 IVVNLTGRLNKCG 73
Score = 74.9 bits (176), Expect = 1e-12
Identities = 34/45 (75%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEEARR 123
VISPRFDV + D+E+W NLLPSRQFG++VLTTS GIM HEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 128 bits (308), Expect = 1e-28
Identities = 62/77 (80%), Positives = 64/77 (83%)
Frame = -3
Query: 472 MVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGK 293
MVRM VL ALKSI+NAEKRGKRQ I PCSKV V FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 292 IVVNLTGRLNKCGSFHL 242
IVVNLTGRLNKCG L
Sbjct: 184 IVVNLTGRLNKCGVISL 200
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEEARR 123
VIS RFDV + D+++W NLLP RQFG++VLTT GI+ HEEARR
Sbjct: 197 VISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARR 241
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 116 bits (279), Expect = 3e-25
Identities = 55/75 (73%), Positives = 61/75 (81%)
Frame = -3
Query: 478 LAMVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRA 299
+ MV M VL ALKS ++AEK GKRQ I CSK V+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 298 GKIVVNLTGRLNKCG 254
GK+VVNLTGRLNKCG
Sbjct: 157 GKMVVNLTGRLNKCG 171
Score = 64.9 bits (151), Expect = 1e-09
Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEEARR 123
VISPRFDV + D+E+W NLLP+RQFG++VLTT GIM EE R+
Sbjct: 172 VISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 116 bits (279), Expect = 3e-25
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = -3
Query: 445 ALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRL 266
ALKSI+NAEKRGKRQ I CSKV V+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRL
Sbjct: 176 ALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRL 235
Query: 265 NKCG 254
NKCG
Sbjct: 236 NKCG 239
Score = 62.1 bits (144), Expect = 7e-09
Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEEARR 123
VI+ RFDV D+E+W NL PS QFG++VLTTS GIM HEEAR+
Sbjct: 240 VINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQ 284
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 115 bits (276), Expect = 7e-25
Identities = 54/73 (73%), Positives = 59/73 (80%)
Frame = -3
Query: 472 MVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGK 293
MVR+ VL LKS++NAEKRGKRQ I P SKV +KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 292 IVVNLTGRLNKCG 254
IVV L GRLNKCG
Sbjct: 61 IVVELNGRLNKCG 73
Score = 72.1 bits (169), Expect = 7e-12
Identities = 34/45 (75%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMXHEEARR 123
VISPRFDV + +IE WT LLPSRQFG++VLTTS GIM HEEARR
Sbjct: 74 VISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 110 bits (264), Expect = 2e-23
Identities = 53/73 (72%), Positives = 60/73 (82%)
Frame = -3
Query: 472 MVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGK 293
MVR VL ALK I+NA+KRGKRQ + PCS+V ++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 292 IVVNLTGRLNKCG 254
+VV LT RLNKCG
Sbjct: 60 MVVYLTDRLNKCG 72
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEEARR 123
VISPRF V + D+E+W NLLPS QFG+++LTTS GI EEARR
Sbjct: 73 VISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARR 117
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 5e-16
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3
Query: 340 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGSFHLV 239
GYI EFE +DDHRAGKIVV L GR+NKCG V
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVIRCV 140
Score = 49.2 bits (112), Expect(2) = 5e-16
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = -3
Query: 478 LAMVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKH 341
++ V + + +S++NAEKRGKRQ + P SKV +KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 81.4 bits (192), Expect = 1e-14
Identities = 37/67 (55%), Positives = 46/67 (68%)
Frame = -3
Query: 454 LXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 275
L AL +++N E R +Q I P SK+ + L VM K GYIGEFE +DD RAGKI+V L
Sbjct: 7 LANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLL 66
Query: 274 GRLNKCG 254
GR+NKCG
Sbjct: 67 GRINKCG 73
Score = 31.9 bits (69), Expect = 8.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMXHEEARR 123
ISPR+ + N + R + LPS++ G ++++T G+M H + R
Sbjct: 75 ISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIR 121
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = -3
Query: 472 MVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGK 293
M + L AL I N+E+ GKR+ I P SK+ + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 292 IVVNLTGRLNKCGS 251
V L GR+NK G+
Sbjct: 61 YRVQLLGRINKAGA 74
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEA 129
I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA
Sbjct: 75 IKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEA 116
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 69.7 bits (163), Expect = 4e-11
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = -3
Query: 457 VLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 278
+L AL++I NAE+RGK + P S V FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 277 TGRLNKC 257
GR+N C
Sbjct: 65 QGRVNDC 71
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = -2
Query: 242 RFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEA 129
R DV +IE++T LP+RQ+GY+V+TT GI+ HEEA
Sbjct: 77 RQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEA 115
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.5 bits (160), Expect = 8e-11
Identities = 35/74 (47%), Positives = 43/74 (58%)
Frame = -3
Query: 472 MVRMXVLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGK 293
MV + L AL +I NAE GK + P SK L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 292 IVVNLTGRLNKCGS 251
V L GR+NKCG+
Sbjct: 61 YSVTLVGRINKCGA 74
Score = 45.6 bits (103), Expect = 7e-04
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEAR 126
I PR+ V ERW LP++ FG L+LTTS G+M EAR
Sbjct: 75 IKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEAR 117
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = -3
Query: 454 LXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 275
L A+ +I NAE G+++ I P SK+ L VM +GYI FE V++HR GK +V L+
Sbjct: 6 LSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELS 65
Query: 274 GRLNKCGS 251
G +N CG+
Sbjct: 66 GNINDCGA 73
Score = 37.5 bits (83), Expect = 0.18
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEARR 123
I PRF + + E + LP+R FG L+++T+ G+M ++AR+
Sbjct: 74 IRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARK 117
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = -3
Query: 439 KSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNK 260
K+I+NA + GKRQ + ++ FL M++HGYI F + D R+GK +++L GRLN+
Sbjct: 10 KAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNR 69
Query: 259 CGS 251
CG+
Sbjct: 70 CGA 72
Score = 40.7 bits (91), Expect = 0.019
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEE 132
ISP + V + IE + T LLP+RQFG+++ TS GI+ H+E
Sbjct: 73 ISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = -3
Query: 457 VLXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 278
+L +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK V+L
Sbjct: 6 ILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHL 65
Query: 277 TGRLNKCGS 251
++ KCG+
Sbjct: 66 LAKITKCGA 74
Score = 37.5 bits (83), Expect = 0.18
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEA 129
ISPRF V + W LPS G LV+TT+ G+M H EA
Sbjct: 75 ISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEA 116
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 55.2 bits (127), Expect = 8e-07
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = -3
Query: 445 ALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRL 266
AL + NAE G + P S + L V+ GY+ FE VDD +AGK V L G +
Sbjct: 27 ALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAI 86
Query: 265 NKCGS 251
N+CG+
Sbjct: 87 NECGA 91
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEAR 126
+ PR+ ++ E+W LP+R +G L++TTS G+M H EAR
Sbjct: 92 VKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAR 134
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = -3
Query: 454 LXXALKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 275
L + +I NA + GK + I P S + + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 274 GRLNKCG 254
+N CG
Sbjct: 66 DTINNCG 72
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 VISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMXHEEARR 123
VI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+
Sbjct: 73 VIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.044
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -3
Query: 334 IGEFEIVDDHRAGKIVVNLTGRLNK 260
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 38.7 bits (86), Expect = 0.077
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = -3
Query: 442 LKSIHNAEKRGKRQXXIXPCSKVXVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLN 263
L + N ++G+ + P S + +K + +M + GYI + +VD R I + L+ N
Sbjct: 10 LSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFN 69
Query: 262 KCGS 251
+ +
Sbjct: 70 EANA 73
Score = 37.5 bits (83), Expect = 0.18
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -2
Query: 251 ISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMXHEEAR 126
I PRF V +++E++ LP+ FG L+L+TS G++ + EA+
Sbjct: 74 IKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAK 116
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 37.9 bits (84), Expect = 0.13
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -3
Query: 364 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG 254
F+TV MK G+FEIVD+ G+I V+L G LNK G
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYG 36
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 33.1 bits (72), Expect = 3.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 316 VDDHRAGKIVVNLTGRLNKCGSFHLVLMFPSTILKDGLICSPHDSLVT 173
VDDH++G+I++ GRLNK G V+ F S + L P S T
Sbjct: 912 VDDHKSGEIILEFDGRLNKWG----VISFRSDVKVKKLSPGPQVSFPT 955
>UniRef50_Q0VQ79 Cluster: Membrane-bound lytic murein
transglycosylase D; n=1; Alcanivorax borkumensis
SK2|Rep: Membrane-bound lytic murein transglycosylase D
- Alcanivorax borkumensis (strain SK2 / ATCC 700651 /
DSM 11573)
Length = 539
Score = 32.3 bits (70), Expect = 6.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 275 RQTKQVWVISPRFDVPINDIERWTNLLPSRQF 180
R ++ I+ RF+V +NDI+ W N + S Q+
Sbjct: 491 RNGDSLYAIADRFNVSVNDIKSWNNSVASNQY 522
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 31.9 bits (69), Expect = 8.8
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 PCSKVXVKFL--TVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGSFHLVLMFPSTIL 215
P ++V ++ L ++M+K+G + + + DD R K+ + +N C L + +P T+
Sbjct: 153 PSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLSSCYSSDVNACKKSRLDVAYPETLK 212
Query: 214 KDGLIC 197
+ +IC
Sbjct: 213 RIKVIC 218
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,440,868
Number of Sequences: 1657284
Number of extensions: 6122904
Number of successful extensions: 11027
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11018
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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