Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30364.Seq
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.6  
AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal glutath...    24   4.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.6  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.0  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   8.0  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 153 CHPLFLI*RCSTIINTLTLVFSVYLSF*ILKYVF 52
           CH + L   CS  I+TLTL       F ++ Y F
Sbjct: 168 CHTVPLAQGCSVYISTLTLTSIAIDRFFVIIYPF 201


>AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal
           glutathione transferase GSTMIC2protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 515 FFLSGFCYLDLNNTLFCSITLIK--CASRSIFYIYFP*LLIP 634
           FF+ GF YL  N   + +I L +   ASR +  I +  ++IP
Sbjct: 83  FFVIGFLYLLTNPAPWLAINLYRLVAASRILHTIVYAVVVIP 124


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 233 RKGGKSQKQYIVDLESFNANGGG 301
           +KGG+ +K YI D ++     GG
Sbjct: 899 KKGGRGRKDYISDSDASGGEVGG 921



 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 152  QSRIKSNGDSQKSRRNLEVHV*QKRMGRKGGKSQKQYIVD 271
            ++R  S GDS       E    +K+ G  GG+ ++Q  +D
Sbjct: 960  KARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMD 999


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 156 PGLKVTEIAKKAGEIWRSMYDK 221
           P   + E++   GE W  +YDK
Sbjct: 340 PRPDIIEVSPSEGETWDGIYDK 361


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 500 HEMMFFFLSGFCYLDLNNTL--FCSITLIKCASRSIFYIYF 616
           H+ +FF L    +LDL+NT   + +   ++   R + Y+ +
Sbjct: 75  HQDIFFPLISLVFLDLSNTRLEYQAFIALRSVQRRVQYVSY 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,900
Number of Sequences: 2352
Number of extensions: 10536
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)