Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30363.Seq
(715 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 154 2e-36
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 146 4e-34
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 146 6e-34
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 134 3e-30
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 95 2e-18
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 89 8e-17
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 85 2e-15
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 82 1e-14
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 82 1e-14
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 69 1e-10
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 56 1e-06
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 55 2e-06
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 52 1e-05
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 52 1e-05
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 47 4e-04
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 43 0.007
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 42 0.015
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 41 0.035
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 38 0.19
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 38 0.25
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 37 0.43
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 36 0.75
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 36 0.75
UniRef50_Q1Q3S6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q0DJR6 Cluster: Os05g0237700 protein; n=9; Oryza sativa... 34 3.0
UniRef50_Q92347 Cluster: Pumilio domain-containing protein C6G9.... 34 4.0
UniRef50_Q2IIU4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 9.2
UniRef50_Q8S5P9 Cluster: Putative uncharacterized protein OSJNBb... 33 9.2
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 154 bits (373), Expect = 2e-36
Identities = 92/180 (51%), Positives = 114/180 (63%), Gaps = 11/180 (6%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEEEV*XRASRCKHQARPSAN----PLRSFTWWKY*VP 198
MGISRD+WHKRR TG + + ++ + RP+AN P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANTKIGPRRIHT---VRVR 49
Query: 199 CAASGHR*LLLGIGMFN-------SQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF 357
+R L L +G F+ +TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+
Sbjct: 50 GGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPY 109
Query: 358 RQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVXVL*KSNSTQG 537
RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L + QG
Sbjct: 110 RQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +3
Query: 450 EKSKDSKKILGKATSC*GXGALEEQFHTGRLLACVASRPGQCGRADGYI 596
+K D +K K +S LEEQF G+LLAC+ASRPGQCGRADGY+
Sbjct: 146 QKKYDERKKNAKISSL-----LEEQFQQGKLLACIASRPGQCGRADGYV 189
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 146 bits (355), Expect = 4e-34
Identities = 86/160 (53%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEEEV*XRASRCKHQARPSAN----PLRSFTWWKY*VP 198
MGISRD+WHKRR TG + + ++ + RP+AN P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANTKIGPRRIHT---VRVR 49
Query: 199 CAASGHR*LLLGIGMFN-------SQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF 357
+R L L +G F+ +TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+
Sbjct: 50 GGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPY 109
Query: 358 RQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 477
RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 110 RQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 146 bits (353), Expect = 6e-34
Identities = 85/170 (50%), Positives = 106/170 (62%), Gaps = 1/170 (0%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEEEV*XRASRCKHQARPSANPLRSFTWWKY*VPCAAS 210
MGISRD+WHKRR TG + + ++ + RP+AN
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANT-------------KIG 39
Query: 211 GHR*LLLGI-GMFNSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 387
R + + G +TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY L
Sbjct: 40 PRRIHTVRVRGGCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 99
Query: 388 PLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVXVL*KSNSTQG 537
PLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L + QG
Sbjct: 100 PLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTK 193
GKR P KKRKY LGRPAANT++GP+RIH+VR RGG T+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +3
Query: 450 EKSKDSKKILGKATSC*GXGALEEQFHTGRLLACVASRPGQCGRADGYI 596
+K D +K K +S LEEQF G+LLAC+ASRPGQCGRADGY+
Sbjct: 126 QKKYDERKKNAKISSL-----LEEQFQQGKLLACIASRPGQCGRADGYV 169
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 134 bits (323), Expect = 3e-30
Identities = 87/179 (48%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEEEV*XRASRCKHQARPSANP-LRSFTWWKY*VPCAA 207
MGISRD HKRRATG + + R R RP+AN L S K
Sbjct: 1 MGISRDSAHKRRATGGKRKS--------LRKKRKFELGRPAANTKLGSGRVHKVRTRGGN 52
Query: 208 SGHR*LLLGIGMFN-------SQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQW 366
+ R L L G F +TRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQW
Sbjct: 53 TKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQW 112
Query: 367 YESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVXVL*KSNSTQG 537
YE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KV + T G
Sbjct: 113 YEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 94.3 bits (224), Expect = 3e-18
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 256
GKR +RKKRK+ LGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Score = 56.4 bits (130), Expect = 7e-07
Identities = 22/29 (75%), Positives = 28/29 (96%)
Frame = +3
Query: 510 ALEEQFHTGRLLACVASRPGQCGRADGYI 596
ALE+QF +GR+LAC++SRPGQCGR+DGYI
Sbjct: 163 ALEDQFTSGRILACISSRPGQCGRSDGYI 191
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 95.1 bits (226), Expect = 2e-18
Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEE--EV*XRASRCKHQARPSANPLRSFTW-WKY*VPC 201
MGISRD HKRRATG + A ++ E+ + + K + + +R K+
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 202 AASGHR*LLLGIGMFNSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 381
+G+ G +TRI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY
Sbjct: 61 LDTGN--YSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHY 118
Query: 382 TLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQ 489
+ +GRKK A+ E E A K+S RK R+
Sbjct: 119 GVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRK 162
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 253
GK+ RKKRKY LGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTR 75
Query: 254 K 256
K
Sbjct: 76 K 76
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3
Query: 513 LEEQFHTGRLLACVASRPGQCGRADGYI 596
+EEQF +GRLLAC++SRPGQCGRADGYI
Sbjct: 171 IEEQFGSGRLLACISSRPGQCGRADGYI 198
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 89.4 bits (212), Expect = 8e-17
Identities = 59/132 (44%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEEEV*XRASRCKHQARPSANPLRSFTWWKY*VPCAAS 210
MGISRD HKRR TG H ++ + RPS+N + V C
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKY--------ELGRPSSNTKLGSKLVRK-VRCRGG 51
Query: 211 G--HR*LLLGIGMFN-------SQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 363
R L L G F+ +TR++DVVYNAS+NELVRTKTLVKNAIV VD TPF+
Sbjct: 52 NLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKL 111
Query: 364 WYESHYTLPLGR 399
W+++HY L LG+
Sbjct: 112 WFKTHYGLELGK 123
Score = 86.2 bits (204), Expect = 7e-16
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +2
Query: 77 GKRAPI-RKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 253
G R P+ +KKRKY LGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TR
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTR 74
Query: 254 K 256
K
Sbjct: 75 K 75
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 513 LEEQFHTGRLLACVASRPGQCGRADGYI 596
L +QF +GRLLAC++SRPGQCGR DGY+
Sbjct: 142 LLDQFSSGRLLACISSRPGQCGRCDGYV 169
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +2
Query: 80 KRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 256
KR+ RKKR + GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARK 75
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3
Query: 510 ALEEQFHTGRLLACVASRPGQCGRADGYI 596
ALE+QF GRL A V+SRPGQ GR DGYI
Sbjct: 98 ALEKQFEAGRLYAVVSSRPGQSGRVDGYI 126
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +1
Query: 253 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 432
+TRI+DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 173 KTRILDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 253
G P+++++ Y LGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 254 KPVSLMLCIMHLTMN 298
K + +L ++++ N
Sbjct: 173 K--TRILDVVYIATN 185
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 82.2 bits (194), Expect = 1e-14
Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQ--EEEV*XRASRCKHQARPSANPLRSFTWWKY*VPCA 204
MGI R HKR+ TG +T H + + E+ + + AR +P+R+ + +
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGAR-RVSPVRA-RGGNFKIRAL 58
Query: 205 ASGHR*LLLGIGMFNSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYT 384
+ R++DVVYNA++NELVRTKTLVKN IV VDA PF++WY HY
Sbjct: 59 RLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYG 118
Query: 385 LPLGRKKGAKLTEAEEAIINKKRSQKTA 468
+ L K K T+A A+ +K+ +K+A
Sbjct: 119 IDLDADK--KSTKA--AVAAEKKGRKSA 142
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 256
GK RK+ K LGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE +
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHR 75
Query: 257 PVSLMLCIMHLTMNWCVQ 310
V L+ + + T N V+
Sbjct: 76 -VRLLDVVYNATSNELVR 92
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 510 ALEEQFHTGRLLACVASRPGQCGRADGYI 596
A+ +Q GR+LA + SRPGQ GRADG +
Sbjct: 174 AIADQLREGRVLARITSRPGQSGRADGIL 202
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 253
GK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITK 74
Score = 60.9 bits (141), Expect = 3e-08
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Frame = +1
Query: 31 MGISRDHWHKRRATGWETCAHTQEEEV*XRASRCKHQARPSANPLRSFTWWKY*VPCAAS 210
MGI+RD HKRRATG + ++ +++ R R A + +Y +
Sbjct: 1 MGITRDSRHKRRATGGKK--NSMQKKKKNTMGRQPANTRLGAIRVHDVRC-RYGI----I 53
Query: 211 GHR*LLLGIGMFN--SQ-----TRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 369
R L L G F+ SQ T+I++VVYNAS+N+ VRT TLVK AI+ +D PFR W+
Sbjct: 54 KRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWF 113
Query: 370 ESHYTLPLGRKKGAKLTEAEEAIINKK----RSQKTARKYLARQ 489
Y + K E+ KK + ++ K +A+Q
Sbjct: 114 LKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQ 157
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 510 ALEEQFHTGRLLACVASRPGQCGRADGYI 596
AL E F +GR+LAC++SRPGQ G +GYI
Sbjct: 191 ALLEGFQSGRVLACISSRPGQTGSVEGYI 219
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Frame = +2
Query: 98 KKRKYXLGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECST 250
KKRKY LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 251 RKPVSLMLCIMHLTMNWCVQ 310
K ++ + + T N V+
Sbjct: 83 HK-ARILQVVYNSTSNELVR 101
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 232 GIGMFNSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 360
G + + RI+ VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 77 GSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
Score = 33.5 bits (73), Expect = 5.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 519 EQFHTGRLLACVASRPGQCGRADGYI 596
+Q +LA ++SRPGQ G ADGYI
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYI 158
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +2
Query: 68 PPAGKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECS 247
P GK P KR+Y LGR TRLG + + +RS GGN+K+ LR D N + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKT 71
Query: 248 TRK 256
TRK
Sbjct: 72 TRK 74
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 77 GKRAPI-RKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 253
G +A I RKKR G ++T++G +++ VR RGGN KY+ALRLD G+F + + R
Sbjct: 15 GAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFR 74
Query: 254 KPVSLMLCIMHLTMNWCVQ 310
L+ + H + N V+
Sbjct: 75 M-AKLLQVVYHPSSNELVR 92
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +1
Query: 259 RIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 360
+++ VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 77 KLLQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +3
Query: 510 ALEEQFHTGRLLACVASRPGQCGRADGYIXXXXXXXXXXXXXXSKRAK 653
+L+E+F TGRLLAC++S+PGQ GRADGY+ +K+AK
Sbjct: 73 SLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Frame = +1
Query: 322 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 480
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 481 ARQRLAKVXV 510
RQ L + V
Sbjct: 61 TRQALPQANV 70
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 238
G ++ RKKR + GR +NT++G + + +R RGG K RAL L GNFS+ S
Sbjct: 16 GLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVS 69
Score = 40.3 bits (90), Expect = 0.046
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +1
Query: 31 MGISRDHWHKRRATGW-ETCAHTQEEEV*XRASRCKHQARPSANPLRSFTWWKY*VPCAA 207
MGI+R+ HKR++TG ++C + R +PS + K V
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGR--------QPSNTKIGRRCVVKLRVRGGG 52
Query: 208 SGHR*LLLGIGMFNS-------QTRIIDVVYNASNNELVRTKTLVKNAIVVVD 345
R L L G F+ + +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 53 VKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLD 105
Score = 39.5 bits (88), Expect = 0.080
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 513 LEEQFHTGRLLACVASRPGQCGRADGYI 596
L +Q +G++LA + SRPGQ GRADGYI
Sbjct: 135 LIDQILSGKILARICSRPGQSGRADGYI 162
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 68 PPAGKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECS 247
P G+ + K++ +GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 11 PSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGE 70
Query: 248 TRK 256
T+K
Sbjct: 71 TKK 73
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 41.9 bits (94), Expect = 0.015
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 546 ACVASRPGQCGRADGYI 596
AC+ASRPGQCGRADGYI
Sbjct: 114 ACIASRPGQCGRADGYI 130
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 40.7 bits (91), Expect = 0.035
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 77 GKRAPIRKKRKYXLGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSW 232
GK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 9 GKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQW 61
Score = 34.7 bits (76), Expect = 2.3
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +1
Query: 247 NSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF 357
+ ++I+ V+YN +N +LV+ + L K I+ +D+ PF
Sbjct: 67 SKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 68 PPAGKRAPIRKKRKYXLGRPAANTRLGPQR-IHSVRSRGGNTK 193
P G+ P RKKRK+ +G P T +G +R + R GGN K
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 RKKRKYXLGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSECSTRK 256
RKKR++ LGR T+LG + V R+ GGNTK +T N SE +K
Sbjct: 21 RKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKK 75
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 37.1 bits (82), Expect = 0.43
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 68 PPAGKRAPIRKKRKYXLGRPAANTRLGPQ-RIHSVRSRGGNTKYR 199
P G+ RKKRK LGR +NTR+ Q + +R+ GGN K R
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVR 56
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 36.3 bits (80), Expect = 0.75
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +1
Query: 295 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 474
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 475 YLARQR 492
RQ+
Sbjct: 79 LEKRQQ 84
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 36.3 bits (80), Expect = 0.75
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 241 MFNSQTRIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKL 417
M + ++ + AS EL KTL K A+ ++D PF W + L R G L
Sbjct: 180 MTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLL 239
Query: 418 TEAEEAIINKKRS 456
A+E +INK+ +
Sbjct: 240 NYAQE-LINKQNT 251
>UniRef50_Q1Q3S6 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 374
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -2
Query: 387 QRIMRLIPLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDTGLRVEHSDPQEKLPVSR 208
+RI+R P+ CIY I C H ++ C+ +TGL+++ ++ + +PV
Sbjct: 284 KRILRF--QPKQLCIYLGTEIEVLKECDHNKVMECLGDLYAETGLKLQKNEREVNVPVPD 341
Query: 207 RSARYLVFPPRER 169
+ RY+ + ++
Sbjct: 342 NAYRYIFYMENQK 354
>UniRef50_Q0DJR6 Cluster: Os05g0237700 protein; n=9; Oryza
sativa|Rep: Os05g0237700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 712
Score = 34.3 bits (75), Expect = 3.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 65 GPPAGKRAPIRKKRKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 244
G P G+R P R++R G AA LG + R R + A R DTG+ G+
Sbjct: 583 GLPEGRRRPRRRRRT--AGATAATAELGHTALGRFRRREAKARVAAGRGDTGDPFKGARR 640
Query: 245 STRKPVS 265
R+P +
Sbjct: 641 QRRRPTA 647
>UniRef50_Q92347 Cluster: Pumilio domain-containing protein
C6G9.02c; n=1; Schizosaccharomyces pombe|Rep: Pumilio
domain-containing protein C6G9.02c - Schizosaccharomyces
pombe (Fission yeast)
Length = 655
Score = 33.9 bits (74), Expect = 4.0
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 639 T*SXLDXTRVLCLLRCNHRRDHTDLGDSPRKPANALCGIALLEHL 505
T S D + CLLR H+RD + + RK N L G LLE +
Sbjct: 429 TNSGKDANIIPCLLRSKHKRDKANPENKERKLVNNLLGAQLLEEM 473
>UniRef50_Q2IIU4 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 121
Score = 33.5 bits (73), Expect = 5.3
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 35 VLVGITGISEGPPAGKRAPIRKKRKYXLGRPAANTRLGPQRI-HSVR 172
VL + +S A K A IRK+ +Y GR A TRL P H +R
Sbjct: 63 VLPDVGKLSRSDAAAKAAEIRKRPEYFTGRRADGTRLAPDEYEHLIR 109
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 9.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 331 IVVVDATPFRQWYESHYTLPLGRKK 405
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q8S5P9 Cluster: Putative uncharacterized protein
OSJNBb0058B20.15; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0058B20.15 - Oryza sativa subsp. japonica (Rice)
Length = 472
Score = 32.7 bits (71), Expect = 9.2
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 35 VLVGITGISEGPPAGKRAPIRKK-RKYXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 211
V GI G+SEGP G RA K LGR R G + GG A R
Sbjct: 167 VCFGIGGLSEGPEGGSRAQEEKGCAARRLGRATGRRRRGEESGRRRAEEGGREGSGAGRR 226
Query: 212 DTGNFSWGSECSTRKPV 262
+G G++ + P+
Sbjct: 227 RSGGQLEGAQAAASAPL 243
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 9.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 346 ATPFRQWYESHYTLPLGRKKGAKLTEAE 429
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,363,184
Number of Sequences: 1657284
Number of extensions: 12648904
Number of successful extensions: 35051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35030
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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