Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30353.Seq
(830 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 103 2e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 79 4e-15
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 2e-10
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 62 5e-10
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 9e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 61 9e-10
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 57 2e-08
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 55 6e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 42 6e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 38 0.013
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 36 0.030
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 36 0.040
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 35 0.093
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.12
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 33 0.38
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 1.5
SB_40521| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_9322| Best HMM Match : RGS (HMM E-Value=0.037) 30 2.6
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 3.5
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 29 3.5
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 29 3.5
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 29 3.5
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 29 4.6
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 29 4.6
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 6.1
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 103 bits (246), Expect = 2e-22
Identities = 47/85 (55%), Positives = 62/85 (72%)
Frame = +1
Query: 253 RSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPP 432
+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL KKTGPP
Sbjct: 74 KSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGPP 133
Query: 433 AVEVTSAEQAKELIDANTVIVFGFF 507
A ++ +A+ K+ I V V GFF
Sbjct: 134 AKDLATADAMKDFI-TKEVAVVGFF 157
Score = 92.3 bits (219), Expect = 4e-19
Identities = 39/73 (53%), Positives = 55/73 (75%)
Frame = +2
Query: 35 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 214
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 215 PEYAKAATKLAEE 253
PEYAKAA +L E
Sbjct: 61 PEYAKAAGQLKSE 73
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 20 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 187
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 188 WCGHCKSLAPEYAKAATK 241
WCGHCK LAP + + K
Sbjct: 413 WCGHCKQLAPIWDQLGEK 430
Score = 44.8 bits (101), Expect = 9e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK---KKTGP 429
I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+ K
Sbjct: 437 IVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNE 494
Query: 430 PAVE 441
PA E
Sbjct: 495 PAAE 498
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 495 IWFLLDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIQ 605
+ F D+ S AK FLS A +DD F IVSD+ + Q
Sbjct: 154 VGFFTDKESDAAKAFLSAADGIDDVEFGIVSDKLLPQ 190
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 82.2 bits (194), Expect = 5e-16
Identities = 37/57 (64%), Positives = 42/57 (73%)
Frame = +2
Query: 86 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ D
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLND 111
Score = 69.7 bits (163), Expect = 3e-12
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAV 438
PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP +
Sbjct: 228 PIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSR 287
Query: 439 EVTSAEQAKELI-DANTVIVFGFF 507
++S + ++ + + + V + GFF
Sbjct: 288 ILSSLKAVQDFMKEKDDVTIMGFF 311
Score = 68.5 bits (160), Expect = 6e-12
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG---- 426
P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++
Sbjct: 113 PVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWK 172
Query: 427 -PPAVEVT-SAEQAKELIDANTVIVFGFF 507
PP +T + E E+++ ++++ FF
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFF 201
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +2
Query: 95 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KAA +L + D
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHD 226
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPP 432
I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK---- 630
Query: 433 AVEVTSAEQAKE 468
A S E+AK+
Sbjct: 631 ATVSLSKEKAKD 642
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 23 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 193
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 194 GHCKSLAPEYAK 229
G +L P + K
Sbjct: 556 G--IALEPTFKK 565
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +1
Query: 259 PIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPP 432
P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP
Sbjct: 590 PVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPS 649
Query: 433 AVEVTSAEQ-AKELIDANTVIVFGF 504
+VE+ S + K+L DA + +V GF
Sbjct: 650 SVEIKSVDHLEKKLDDAESNVVVGF 674
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 107 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + D
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 588
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Frame = +2
Query: 110 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE-EDLLSN*RKLT 283
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y + KL + +D++ K+
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVI--AKMD 921
Query: 284 QLKNRISPRATVYEDTRLSNSSGMAVLSTIQVVV 385
N P +V + + + G+ ++ I +++
Sbjct: 922 ATANDAPPNFSV-QGIIIISIIGIIIIVIIMIII 954
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 313 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 426
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +2
Query: 101 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 244
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKAAT+L
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL 126
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +1
Query: 253 RSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKK 417
+ +K+ +DAT A Y V+GYPT+K F G S DY GGR A DII +
Sbjct: 127 KGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALD 186
Query: 418 KTG-----PPAVEVTSAEQAKELIDANTVIVFGF 504
K P ++ S E KE + + + V F
Sbjct: 187 KAADSIEPPEVIQAISNEVLKEGCNEHPICVIAF 220
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 295 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 402
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 107 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + D
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 63
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 61.3 bits (142), Expect = 9e-10
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 98 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 223
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +1
Query: 256 SPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 426
S + +AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KTG
Sbjct: 72 SDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 61.3 bits (142), Expect = 9e-10
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 244
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A +L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 95 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + +
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNN 101
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 86 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY AA L E++
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 257 L 259
+
Sbjct: 133 I 133
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 89 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 235
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 RRSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTG 426
RR I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + G
Sbjct: 264 RRRLIAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREG 319
Query: 427 PP 432
PP
Sbjct: 320 PP 321
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 164 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPT 336
P LA VDAT+E L + + V GYPT
Sbjct: 134 PGVLAAVDATKEAALGKRFKVEGYPT 159
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +2
Query: 101 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
E++ LV L ++F + TE++LV FYAPWCGHCK+ P+Y KAA ++
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQ 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 71 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 250
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 251 EDLLSN 268
ED N
Sbjct: 99 EDANCN 104
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 271 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 429
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 268 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 411
LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 105 LAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 101 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKE 71
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 119 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEDL 259
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA + L
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGL 71
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 116 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 244
V SK F V+ + + +V+FYAPWCG C AP+Y + A L
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML 480
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 74 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAA 235
+AL + NV L +F + +T+ + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 414
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 417
+ +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 19 LTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 98 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 235
+E V +L+K F+ I + V+FYAPWC HC LAP + + A
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLA 132
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 319 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 411
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 125 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAKAA 235
+A F +VI T+ ++++FYA WCG C+ + P++ K A
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 107 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAPEYAKAATK 241
NV VL + F +T T+ ++ +F A WCG CKS+AP Y+ + K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEK 55
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 274 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 426
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 36.3 bits (80), Expect = 0.030
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 107 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 250
NV+V+ +F +V + ++++F A WCG CKS+AP + + K +
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD 59
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 274 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 369
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 35.9 bits (79), Expect = 0.040
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +2
Query: 104 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ D
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 441
+ +A V+ +E +LA+ GV+ + F G ++Y G + + + + PP
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTN 162
Query: 442 VTSAEQAKELIDANTVIVFGFF 507
+ + +Q L DA V G+F
Sbjct: 163 IDNKKQRTLLEDAEGTKVVGYF 184
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.12
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 137 ETVITTTEYILVEFYAPWCGHCKSLAP 217
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 134 FETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA-----TKLAEEDLLSN*RKLTQLKNR 298
F+ + E ++F A WCG C+ + P++ + A K A+ D+ N ++ ++ NR
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFKGVKCAKVDVDVNSVEVLRVDNR 63
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 313 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 426
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 131 NFETVITTTEYIL--VEFYAPWCGHCKSLAPEYAKAATKLAEEDLLSN*RKLTQLKNRIS 304
+F+ +++++ +L V F+APW HC + + A + + + N + + ++ +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQKVVDRIDGANA 70
Query: 305 PRAT 316
P T
Sbjct: 71 PELT 74
>SB_40521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 698 ADPQGFLHLQLDTFLFEVLEKHNIFIFSXQLLDHF 594
++P G+LH DTF FE+ + I ++S Q+ HF
Sbjct: 4 SNPGGYLH---DTFYFELKQYLGITVYSEQVQQHF 35
>SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -1
Query: 722 WTNTXSHGADPQGFLHLQLDTFLFEVLEKHNIFIFSXQLLDHFLIADNSKYLVINNLSS* 543
W HG D G + ++L L +LEKH + ++ D L + Y N+
Sbjct: 68 WKELKLHGGDIDGKMEMKLRNNLIRILEKHGL----SRIADAVLEGHGTGYATDTNVVRD 123
Query: 542 KESFG 528
SFG
Sbjct: 124 MNSFG 128
>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Frame = -3
Query: 540 GKFWLWLSSGPK----ETKYNNSIGIDK--FFS---LFSRGDLNSRGASLLLQPTDDVIS 388
GKF+L + P ET Y+N+IGI + +++ +FS+ L S G S+L DD+ S
Sbjct: 234 GKFYLRIVVNPNRTVAETDYDNNIGICEVDYYNPVVIFSKCRLVSTGQSILPVLPDDLSS 293
Query: 387 LTTT*IVDRTAIPEEFESRVSSYT 316
T + + + + ++SY+
Sbjct: 294 RTDSGVRQQETTRAIIKGDIASYS 317
>SB_9322| Best HMM Match : RGS (HMM E-Value=0.037)
Length = 1068
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 776 KRILEHXHARIXR*LGMLWTNTXSHGADPQGFLHLQLDTFLFEVLEKHNI 627
KR+L+ H R+ L +HG DP GF L+ D F + ++K +
Sbjct: 901 KRVLQSTHGRLPVKLEYFRRYLQTHG-DPDGFSKLENDFFFYLEVQKFKV 949
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 170 VEFYAPWCGHCKSLAPEYAKAATKL 244
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 337 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFWTR 516
L+F + S I SGG Q + W A E TSAE+A +D V + G W +
Sbjct: 793 LRFKQEASEIMESGGFQ---LHKWHSNVL--EAEESTSAERANRAVDRPPVKILGIPWDK 847
Query: 517 AQPEPKLSF 543
+ E ++F
Sbjct: 848 NKDELTIAF 856
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 107 NVLVLSKANFETVITTTEYILVEFYA 184
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 337 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFWTR 516
L+F + S I SGG Q + W A E TSAE+A +D V + G W +
Sbjct: 472 LRFKQEASEIMESGGFQ---LHKWHSNVL--EAEESTSAERANRAVDRPPVKILGIPWDK 526
Query: 517 AQPEPKLSF 543
+ E ++F
Sbjct: 527 NKDELTIAF 535
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 319 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 411
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_12735| Best HMM Match : PT (HMM E-Value=0.36)
Length = 1148
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 543 STAQVVDDQVFAIVSDEKVIQELXAEDEDVVLFKNFEEKRVQLKMKKSL 689
+TA +Q A DEK E +EDV L+K+ EEK+ K ++SL
Sbjct: 899 ATADQAKEQDSATFPDEKSDGENVDIEEDVPLWKDNEEKQEAQKHQRSL 947
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 337 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFWTR 516
L+F + S I SGG Q + W A E TSAE+A +D V + G W +
Sbjct: 180 LRFKQEASEIMESGGFQ---LHKWHSNVL--EAEESTSAERADRAVDRPPVKILGIPWDK 234
Query: 517 AQPEPKLSF 543
+ E ++F
Sbjct: 235 NKDELTIAF 243
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 337 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFWTR 516
L+F + S I SGG Q + W A E TSAE+A +D V + G W +
Sbjct: 706 LRFKQEASEIMESGGFQ---LHKWHSNVL--EAEESTSAERADRAVDRPPVKILGIPWDK 760
Query: 517 AQPEPKLSF 543
+ E ++F
Sbjct: 761 NKDELTIAF 769
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 265 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 366
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,668,503
Number of Sequences: 59808
Number of extensions: 463946
Number of successful extensions: 1273
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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