Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30351.Seq
(814 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1370 - 32990002-32990244,32990950-32991943,32992019-329922... 60 2e-09
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 37 0.017
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 31 0.82
10_08_0050 + 14469879-14470072,14470620-14471094 31 1.4
05_04_0031 + 17353292-17354353 31 1.4
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 31 1.4
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 30 2.5
08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456... 30 2.5
03_02_0100 + 5622360-5622524,5622603-5622701,5622979-5623044 30 2.5
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 29 3.3
10_08_0042 - 14383143-14383628,14383647-14384609,14384697-143864... 29 4.4
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 4.4
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 29 4.4
04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 29 4.4
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 29 5.8
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 29 5.8
06_03_0518 - 21685950-21686221,21686768-21686882 29 5.8
04_04_1220 + 31843628-31844755 29 5.8
02_02_0256 - 8362374-8363003 29 5.8
01_05_0693 - 24339917-24340524,24340778-24341252 29 5.8
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016 28 7.7
03_05_0355 - 23420410-23420548,23420643-23420794 28 7.7
02_01_0360 - 2594534-2594601,2594778-2594829,2594915-2595029,259... 28 7.7
01_06_1475 + 37634831-37636297 28 7.7
01_01_0937 - 7388230-7388283,7388957-7389091,7389201-7389365,738... 28 7.7
>04_04_1370 -
32990002-32990244,32990950-32991943,32992019-32992240,
32993413-32993543
Length = 529
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Frame = -3
Query: 704 YWRKDARGVXL---RFEPKGLDVQHIVQGPPLEAR-VSPDARRGGRDGCRLRAPEATPRR 537
+WR DARG+ + RF KG + +++ + V + + +++ E
Sbjct: 374 WWRDDARGICIGITRFTNKGHIARAVLESMCFQVNDVLSSMHKDAGEAGEVKSAEGEFLL 433
Query: 536 RRDGAELSS---VQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVW 402
R DG + +Q+QADLLG PV+RP +E+TALGAA AG A+ VW
Sbjct: 434 RVDGGATVNNLLMQIQADLLGSPVVRPADIETTALGAAYAAGLAVGVW 481
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 490 KSAC-ICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRASSGGPW 633
+ AC + ++ PS RRRG G R P P RR SGD RA + PW
Sbjct: 15 RPACRVASQCGGRPSTRRRGAGGGPRRAVPQPPVRRPSGD-RACT--PW 60
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 GKSRQECIGRWAGYCRGPHTHCA-TCDNGRPQGCTFHHEGTNDWYTQ*ISLHLHRTEFCA 527
G+S EC RW + +H A T + T +G N+W ++L HRT F
Sbjct: 369 GRSGAECESRWLNFDDPLISHNAWTAREEKRLILTVQQQGMNNWINIAVTLGTHRTPFQC 428
Query: 528 IPPSARS 548
+ RS
Sbjct: 429 LVRYQRS 435
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 293 GWTDTKNEHVNAENQIELLQFCRRD 219
G+T T ++ N+ N E+L+FCRR+
Sbjct: 101 GFTSTSSDRSNSGNSSEMLRFCRRE 125
>05_04_0031 + 17353292-17354353
Length = 353
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 484 PSKSACIC-TELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRAS-SGGPWTI 639
PS++A I T + AP+ RRGVASG+R R RR G A + G WT+
Sbjct: 187 PSEAAQISNTAATPAPAAARRGVASGSR-----RRARRWLGTVGAHLASGSWTL 235
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 406 TRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTEL---SSAPSLRRRGVASGARSLQP 576
T AR AAP + LS +R G S C ++ +S+ S AS R P
Sbjct: 128 TAAARVHDPAAPSSALSRLRSHGAGACGASLCAIRDVVDAASSASAASTAAASLDRDTTP 187
Query: 577 -SRPPRRASGDTRASSGG 627
+R RRA +SSGG
Sbjct: 188 LTRSSRRAHRAATSSSGG 205
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 373 SAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICT---ELSSAPSLRRR 543
+A ++ + +R A ++A RA S +PS S C S+A +LR R
Sbjct: 3 AAASSSLLAAASSSSRAAAVSARRAP-SASPAAAASLPSPSRASCAPPLRASAARTLRSR 61
Query: 544 GVASGARSLQPSRPPRRAS 600
VAS A ++QP P R S
Sbjct: 62 VVASAAPAMQPP-PASRVS 79
>08_01_0525 +
4564885-4565221,4565337-4565476,4565582-4565677,
4566079-4566146,4566542-4566643,4567492-4567630,
4567758-4567898,4568241-4568297,4568400-4568459,
4568866-4568973,4569834-4569994,4570453-4570531,
4571357-4571490,4571846-4571951,4572244-4572432,
4572595-4572822,4573028-4573183,4573491-4573532,
4573752-4573868,4573945-4574121
Length = 878
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 600 RRAPWRTRWLQTARP*GNSSPTEGWRRTQFCADAG*FTGYTSHSSPHDGKYSPGGGHC 427
R PW ++P + P R+ AD TG + S H PGG HC
Sbjct: 10 RGRPWHVLPSSPSQPPSSPPPRASADRSSAAADLDLGTGRSGEHSVHRVFLDPGGKHC 67
>03_02_0100 + 5622360-5622524,5622603-5622701,5622979-5623044
Length = 109
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 611 RVSPDARRGGRDGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPVIRPLMMESTALGAA 432
RV PD R GC +R E R R +++S ++Q G ++ + + L
Sbjct: 22 RVEPDGRAASASGCLMRRSEGRRRPWRHLLKITSEEIQQVQQGFLTVQKFQVSTAILQII 81
Query: 431 IV 426
I+
Sbjct: 82 II 83
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 512 SVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPSPPAD 372
S +QADLLG PVIRP + AG ++ PP D
Sbjct: 38 SAHLQADLLGSPVIRPSEPLELQKQLELAAGIWIKAVDPAFGLPPVD 84
>10_08_0042 -
14383143-14383628,14383647-14384609,14384697-14386443,
14387901-14388010,14388767-14389003
Length = 1180
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 499 CICTEL--SSAPSLRRRGVASGARSLQPSRPPRRASGDTRASSGGP 630
C C+ + S PS R GV+S L PSRP +R G R P
Sbjct: 140 CCCSGVLGGSPPSSRTAGVSSPG--LSPSRPSKRRIGRARVQPRAP 183
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 511 ELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRASSGGP 630
+ SS PS V +G +L P PP + D +S GP
Sbjct: 53 DFSSDPSTPATPVDNGGPALLPPPPPNTVAADVSSSRSGP 92
>05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 365 GMYRPVGWVLSWATHALRDLRQWPPPGL 448
G PVGW L + T L D PPP L
Sbjct: 926 GNNNPVGWPLRFLTPVLSDENSVPPPSL 953
>04_04_0555 -
26210346-26211458,26211530-26211719,26211826-26211960,
26212072-26212169,26212262-26212425,26213558-26214032
Length = 724
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 511 ELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRAS 618
E+ A LRRRG SG R+ PSR A+ + A+
Sbjct: 22 EMVEASELRRRGKPSGDRATGPSRDGAAAAAEEAAA 57
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 539 RRRDGAELSSVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPSPPADTFLP 360
RRR + L + A G P+ + AA++ G A T+ P PP+ T P
Sbjct: 98 RRRHSSHLFAAPRHASTAGAPIATLRYSAVLGIEAAVLVGTARD--STSSPIPPSSTGAP 155
Query: 359 AL 354
+L
Sbjct: 156 SL 157
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 541 RGVASGARSLQPSRPPRRASGDTRASSGGPWT 636
R AR L+PS PPR ++ + A GG T
Sbjct: 31 RSKRGSARPLKPSPPPRPSASSSAAGGGGATT 62
>06_03_0518 - 21685950-21686221,21686768-21686882
Length = 128
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Frame = +1
Query: 358 AGRNVSAGGLGIVV----GHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSA 525
AGR V A G G G RP + + R R G+P E+ S+
Sbjct: 3 AGRRVLAAGAGCACLRASGRPGAVRPRRRELGLGKVDLARRRRQGLPLIITIAFIEMGSS 62
Query: 526 PSLRRRGVASGARSLQPSRPPRRASGDTRASSGGPW 633
P++ V + +++ P G R W
Sbjct: 63 PTIATATVPTPTTAIRAKSPTPEEMGGRRGPPKRGW 98
>04_04_1220 + 31843628-31844755
Length = 375
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 441 GGGHCRRSRNACVAHDNTQPT 379
GGGH R R +CV D+ +P+
Sbjct: 231 GGGHMRERRTSCVVVDDMEPS 251
>02_02_0256 - 8362374-8363003
Length = 209
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 355 RAGRNVSAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRM-TGIPSKSACICTELSSAPS 531
R GR+ +AGG G +V + A AAP AV+ ++ + +P SAP
Sbjct: 45 RRGRSPAAGGGGGMVRDDQEPTVARPAAPSAVVVVVAPPLPPPLPIHRVPAAAVQPSAPP 104
Query: 532 LRRRGVASGARSLQPSRPPRRAS-GDTRASSGG 627
+ VA A + + + RR S GD+ G
Sbjct: 105 VVADDVALLAYAYEKKKKKRRGSDGDSGGGDDG 137
>01_05_0693 - 24339917-24340524,24340778-24341252
Length = 360
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 557 GRAVCSHRVRHGARLVTHGPPAAGPGQY 640
G A C R+ H +V +G A G G+Y
Sbjct: 291 GSAACGRRLNHAVTVVGYGAAADGGGEY 318
>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
Length = 360
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -3
Query: 581 RDGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPVI----RPLMMESTALGAAIVAGRA 414
+ CR R RRRR A + + A G+PV+ P + +++ GA + A
Sbjct: 165 KKSCRRRLAGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSA 224
Query: 413 MRVWPTTIPSP 381
P +P+P
Sbjct: 225 RATGPWLMPTP 235
>03_05_0355 - 23420410-23420548,23420643-23420794
Length = 96
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 415 ARPATMAAPRAVLSIMRGRMTGIPSKSACICTELS 519
ARP AA + + R+TG PS S C ELS
Sbjct: 50 ARPMAAAAMMGSPAAVAARLTGHPSASVRACCELS 84
>02_01_0360 -
2594534-2594601,2594778-2594829,2594915-2595029,
2595124-2595212,2595326-2595391,2595468-2595657,
2595811-2596037,2596111-2596185,2596283-2596354,
2596507-2596577,2596848-2597036,2597186-2597298,
2598063-2598268
Length = 510
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 391 IVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARS 567
+ V +A PA +AAP AVL+ + SA SS+P LRR GA S
Sbjct: 17 LFVARVALAAPAQLAAPLAVLAAAALAVELAVDASASASASASSSP-LRRFRTRPGASS 74
>01_06_1475 + 37634831-37636297
Length = 488
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 583 PPRRASGDTRASSGGPWTIC*TSSPFGSNRXIT 681
PP++ SG SS WT C ++PF R T
Sbjct: 109 PPQQVSGALDISSDLVWTACGATAPFNPVRSTT 141
>01_01_0937 -
7388230-7388283,7388957-7389091,7389201-7389365,
7389436-7389516,7389692-7389767,7389855-7389988,
7390082-7390174,7390885-7391018,7391125-7391533,
7392381-7392593
Length = 497
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/74 (29%), Positives = 29/74 (39%)
Frame = +1
Query: 367 NVSAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRG 546
NV+AGG A AAP S+ GR G SA AP++ R
Sbjct: 57 NVAAGGGAPGKAGNAKLNLAASAAPVKKGSLASGRNVGTNRASAVKSASAKPAPAISRHE 116
Query: 547 VASGARSLQPSRPP 588
A+ S+ P + P
Sbjct: 117 SATQKESVLPPKVP 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,171,347
Number of Sequences: 37544
Number of extensions: 529084
Number of successful extensions: 1879
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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