Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30347.Seq
(514 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 130 2e-29
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 120 2e-26
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 118 8e-26
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 114 1e-24
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 111 1e-23
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 101 1e-20
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 81 1e-14
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 80 3e-14
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 76 4e-13
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 72 9e-12
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 69 5e-11
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 69 6e-11
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 69 6e-11
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 65 1e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 62 1e-08
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 58 2e-07
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 51 1e-05
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.31
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.95
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.2
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.7
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.2
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 33 2.9
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 33 3.8
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 3.8
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 5.0
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 8.8
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 130 bits (313), Expect = 2e-29
Identities = 59/71 (83%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 429
+IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 60 KIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
Query: 430 HLGGKILGFFF 462
H GGKILGFFF
Sbjct: 120 HTGGKILGFFF 130
Score = 121 bits (292), Expect = 8e-27
Identities = 55/62 (88%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAG+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 257 LL 262
++
Sbjct: 61 IV 62
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 120 bits (289), Expect = 2e-26
Identities = 55/74 (74%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Frame = +1
Query: 244 QSWQIVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEA 420
+S +IVV L GRLNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEA
Sbjct: 57 RSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEA 116
Query: 421 RRKHLGGKILGFFF 462
RRK++GGK+LGFF+
Sbjct: 117 RRKNVGGKVLGFFY 130
Score = 104 bits (249), Expect = 1e-21
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+G+
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 257 LL 262
++
Sbjct: 61 IV 62
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 118 bits (284), Expect = 8e-26
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 429
+IVVNLTGRLNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRK
Sbjct: 183 KIVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRK 242
Query: 430 HLGGKILGFFF 462
H GGKILGFFF
Sbjct: 243 HTGGKILGFFF 253
Score = 115 bits (276), Expect = 7e-25
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR G+
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 257 LL 262
++
Sbjct: 184 IV 185
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 114 bits (275), Expect = 1e-24
Identities = 51/70 (72%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 429
++VVNLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+K
Sbjct: 158 KMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQK 217
Query: 430 HLGGKILGFF 459
H GG+ILGFF
Sbjct: 218 HTGGEILGFF 227
Score = 99.1 bits (236), Expect = 5e-20
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = +2
Query: 71 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 250
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 251 GRLL 262
G+++
Sbjct: 157 GKMV 160
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 111 bits (266), Expect = 1e-23
Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 429
++VV LT RLNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRK
Sbjct: 59 KMVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRK 118
Query: 430 HLGGKILGFFF 462
H GGKILGFFF
Sbjct: 119 HTGGKILGFFF 129
Score = 105 bits (251), Expect = 8e-22
Identities = 48/62 (77%), Positives = 58/62 (93%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAG+
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 257 LL 262
++
Sbjct: 60 MV 61
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 101 bits (242), Expect = 1e-20
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = +2
Query: 98 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGRLL 262
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AG+++
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIV 228
Score = 100 bits (240), Expect = 2e-20
Identities = 46/65 (70%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 429
+IVVNLTGRLNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+K
Sbjct: 226 KIVVNLTGRLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQK 285
Query: 430 HLGGK 444
H G +
Sbjct: 286 HTGSR 290
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 81.4 bits (192), Expect = 1e-14
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +1
Query: 244 QSWQIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEA 420
+S + +++L GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 55 RSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKEC 114
Query: 421 RRKHLGGKILGFFF 462
+++GGKILG+F+
Sbjct: 115 LTENVGGKILGYFY 128
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = +2
Query: 95 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+G+
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGK 58
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 80.2 bits (189), Expect = 3e-14
Identities = 35/71 (49%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRK 429
+I V+L GR+N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++
Sbjct: 59 RITVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKR 118
Query: 430 HLGGKILGFFF 462
++GG++LGFF+
Sbjct: 119 NVGGQVLGFFY 129
Score = 63.3 bits (147), Expect = 3e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +2
Query: 92 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGRL 259
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR GR+
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 76.2 bits (179), Expect = 4e-13
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 262 VNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 438
V L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K +G
Sbjct: 63 VTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIG 122
Query: 439 GKILGFFF 462
G++L + +
Sbjct: 123 GQLLAYVY 130
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 253
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAG 59
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 71.7 bits (168), Expect = 9e-12
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 262 VNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 438
V L GR+NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +G
Sbjct: 63 VQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIG 122
Query: 439 GKILGFFF 462
G+++ + +
Sbjct: 123 GRLIAYVY 130
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 253
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAG 59
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 69.3 bits (162), Expect = 5e-11
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAG+
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 257 LL 262
++
Sbjct: 61 II 62
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEA 420
+I+V L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+M H +
Sbjct: 60 KIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDG 119
Query: 421 RRKHLGGKILGFFF 462
R+ +GG LG+ +
Sbjct: 120 IREKIGGVTLGYVY 133
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 68.9 bits (161), Expect = 6e-11
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 262 VNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 438
V L G +N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +G
Sbjct: 80 VELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIG 139
Query: 439 GKILGFFF 462
G+++ + +
Sbjct: 140 GQVIAYVY 147
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 71 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 250
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 251 GR 256
G+
Sbjct: 76 GK 77
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 68.9 bits (161), Expect = 6e-11
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 262 VNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 438
V L+ +N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +G
Sbjct: 62 VELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIG 121
Query: 439 GKILGFFF 462
GK+L + +
Sbjct: 122 GKLLAYVY 129
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.9 bits (151), Expect = 1e-09
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRK 429
+ +V L+G +N CG I PRF + + E + LP+R FG L+++T+ G+M ++AR++
Sbjct: 59 KFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQ 118
Query: 430 HLGGKILGFFF 462
LGG +L + +
Sbjct: 119 RLGGVLLAYVY 129
Score = 53.6 bits (123), Expect = 3e-06
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +2
Query: 86 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGRLL 262
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR G+ +
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFI 61
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 241 SQSWQIVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEE 417
S+ + V+L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H E
Sbjct: 56 SRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHE 115
Query: 418 ARRKHLGGKILGFFF 462
A + +GG ++G+ +
Sbjct: 116 AAERGIGGFLIGYVY 130
Score = 48.8 bits (111), Expect = 7e-05
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2
Query: 77 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGR 256
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R G+
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +2
Query: 71 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 250
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH E+ VD A
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH----EWNRVDRSSA 86
Query: 251 GR 256
R
Sbjct: 87 AR 88
Score = 34.7 bits (76), Expect = 1.2
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 209 GYIGEFEIVDDHRAGRLL 262
GYI EFE +DDHRAG+++
Sbjct: 107 GYINEFEFIDDHRAGKIV 124
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 256 IVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKH 432
I + L+ N+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ +
Sbjct: 60 IEIELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQK 119
Query: 433 LGGKILGFFF 462
+GG ++ + +
Sbjct: 120 IGGVLIAYVY 129
Score = 41.5 bits (93), Expect = 0.011
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +2
Query: 89 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGRLL*I 268
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R G+++ I
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKIIEI 62
Query: 269 SQAD 280
++
Sbjct: 63 ELSE 66
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.31
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 307 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 462
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.95
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 89 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 232
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 95 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 226
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 370 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 462
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 370 GYLVLTTSGGIMDHEEARRKHLGGKIL 450
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 33.5 bits (73), Expect = 2.9
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +2
Query: 95 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGRLL 262
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R +L
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 263 *ISQAD*TSVVSFHLVLMFPSTILKDGLIC 352
+D + L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 33.1 bits (72), Expect = 3.8
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 253 QIVVNLTGRLNKCGVISPRFDVPINDIER 339
+I V+L G LNK GVI FDV + D+E+
Sbjct: 23 RITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 3.8
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3
Query: 152 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 36
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.1 bits (72), Expect = 3.8
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 271 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 450
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE G +L
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLL 182
Query: 451 GFF 459
G+F
Sbjct: 183 GYF 185
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 80 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 250
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 3.8
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 370 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 462
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 5.0
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 370 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 462
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 8.8
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 370 GYLVLTTSGGIMDHEEARRKHLGGKIL 450
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 8.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 361 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 456
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,175,524
Number of Sequences: 1657284
Number of extensions: 8317354
Number of successful extensions: 18022
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 17635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18005
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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