Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30344.Seq
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    29   0.14 
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    28   0.25 
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   5.4  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   5.4  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   5.4  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   5.4  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   5.4  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   9.4  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 28.7 bits (61), Expect = 0.14
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 261 KCIVFIRPTSENIALLSRELRDPKYGVYFIYXQ*CSF*GR 380
           KC+ F RP S   ALL+ E +   Y + F +     F GR
Sbjct: 158 KCVPFCRPFSGQTALLTPESQSANYALTFAFTAPRVFVGR 197


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 174 VQSIGNLTEGSLLIREDRQSC 236
           ++ +G  T G ++IRED QSC
Sbjct: 849 MKDVGEKTTGPIVIREDNQSC 869


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 417 SXXIITFGQSFDVCLRNYIT 358
           S   +T GQ+FD+  R Y++
Sbjct: 135 SDITLTIGQAFDLAYRRYVS 154


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 417 SXXIITFGQSFDVCLRNYIT 358
           S   +T GQ+FD+  R Y++
Sbjct: 135 SDITLTIGQAFDLAYRRYVS 154


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 417 SXXIITFGQSFDVCLRNYIT 358
           S   +T GQ+FD+  R Y++
Sbjct: 135 SDITLTIGQAFDLAYRRYVS 154


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 417 SXXIITFGQSFDVCLRNYIT 358
           S   +T GQ+FD+  R Y++
Sbjct: 135 SDITLTIGQAFDLAYRRYVS 154


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 417 SXXIITFGQSFDVCLRNYIT 358
           S   +T GQ+FD+  R Y++
Sbjct: 135 SDITLTIGQAFDLAYRRYVS 154


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +3

Query: 252 EHMKCIVFIRPTSENIALLSRELR 323
           EH++ +V  RPT+ N+ L + +++
Sbjct: 80  EHLQYLVTSRPTAVNLKLAADDVK 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,881
Number of Sequences: 2352
Number of extensions: 9798
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)