Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30344.Seq
(577 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119186-1|AAM51046.1| 574|Drosophila melanogaster SD10846p pro... 118 8e-27
AE014297-971|AAF54403.1| 574|Drosophila melanogaster CG8228-PA ... 118 8e-27
M25292-1|AAA17840.1| 397|Drosophila melanogaster dsx protein. 30 2.6
BT029258-1|ABK30895.1| 427|Drosophila melanogaster FI01107p pro... 30 2.6
AY060257-1|AAL25296.1| 427|Drosophila melanogaster GH08308p pro... 30 2.6
AE014297-676|AAF54168.2| 427|Drosophila melanogaster CG11094-PC... 30 2.6
AE014297-675|AAN13385.1| 427|Drosophila melanogaster CG11094-PB... 30 2.6
AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA... 30 2.6
AY058250-1|AAL13479.1| 270|Drosophila melanogaster GH01278p pro... 29 4.5
AE013599-1368|AAM68702.1| 270|Drosophila melanogaster CG8979-PC... 29 4.5
AE013599-1367|AAM68701.1| 270|Drosophila melanogaster CG8979-PB... 29 4.5
AE013599-1366|AAF58602.1| 270|Drosophila melanogaster CG8979-PA... 29 4.5
BT021373-1|AAX33521.1| 286|Drosophila melanogaster LP02810p pro... 29 6.0
AE013599-630|AAF59105.1| 286|Drosophila melanogaster CG11635-PA... 29 6.0
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei... 28 7.9
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro... 28 7.9
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA... 28 7.9
>AY119186-1|AAM51046.1| 574|Drosophila melanogaster SD10846p
protein.
Length = 574
Score = 118 bits (283), Expect = 8e-27
Identities = 60/132 (45%), Positives = 89/132 (67%), Gaps = 2/132 (1%)
Frame = +1
Query: 61 MNVIQAVKMYITKMXXESGPGMKVILMDKETTSIVSMVYSQSEILQKEVYLFERIDSHAK 240
MN+I +K+YI KM ESGPGMK+IL+DKETTSI+SM +SQS++LQ+EVYLFER+DS
Sbjct: 1 MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRS 60
Query: 241 WDNMNT*NA*FLYVQHQRT*LCCHGN*EILNMVFTLY--XXSNVVSKADIKTLAECDDXX 414
+ + ++++ + + N E+ N ++ Y SN++ + DIK LAECD+
Sbjct: 61 NERLKYLKC-IVFIRPTKQNIQLLAN-ELRNPKYSAYYIYFSNIIPRTDIKYLAECDESE 118
Query: 415 AVRXVHXVFADY 450
+VR V ++ADY
Sbjct: 119 SVREVKELYADY 130
>AE014297-971|AAF54403.1| 574|Drosophila melanogaster CG8228-PA
protein.
Length = 574
Score = 118 bits (283), Expect = 8e-27
Identities = 60/132 (45%), Positives = 89/132 (67%), Gaps = 2/132 (1%)
Frame = +1
Query: 61 MNVIQAVKMYITKMXXESGPGMKVILMDKETTSIVSMVYSQSEILQKEVYLFERIDSHAK 240
MN+I +K+YI KM ESGPGMK+IL+DKETTSI+SM +SQS++LQ+EVYLFER+DS
Sbjct: 1 MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRS 60
Query: 241 WDNMNT*NA*FLYVQHQRT*LCCHGN*EILNMVFTLY--XXSNVVSKADIKTLAECDDXX 414
+ + ++++ + + N E+ N ++ Y SN++ + DIK LAECD+
Sbjct: 61 NERLKYLKC-IVFIRPTKQNIQLLAN-ELRNPKYSAYYIYFSNIIPRTDIKYLAECDESE 118
Query: 415 AVRXVHXVFADY 450
+VR V ++ADY
Sbjct: 119 SVREVKELYADY 130
>M25292-1|AAA17840.1| 397|Drosophila melanogaster dsx protein.
Length = 397
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 183 LTVHHTHYAGSFFIH*YHFHSRAALXXHFSNVHFNCLYH 67
L HH H A +H +H H+ A H S+ H + L+H
Sbjct: 116 LLSHHHHVAAPAHVHAHHVHAHHAHGGHHSH-HGHVLHH 153
>BT029258-1|ABK30895.1| 427|Drosophila melanogaster FI01107p
protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 183 LTVHHTHYAGSFFIH*YHFHSRAALXXHFSNVHFNCLYH 67
L HH H A +H +H H+ A H S+ H + L+H
Sbjct: 116 LLSHHHHVAAPAHVHAHHVHAHHAHGGHHSH-HGHVLHH 153
>AY060257-1|AAL25296.1| 427|Drosophila melanogaster GH08308p
protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 183 LTVHHTHYAGSFFIH*YHFHSRAALXXHFSNVHFNCLYH 67
L HH H A +H +H H+ A H S+ H + L+H
Sbjct: 116 LLSHHHHVAAPAHVHAHHVHAHHAHGGHHSH-HGHVLHH 153
>AE014297-676|AAF54168.2| 427|Drosophila melanogaster CG11094-PC,
isoform C protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 183 LTVHHTHYAGSFFIH*YHFHSRAALXXHFSNVHFNCLYH 67
L HH H A +H +H H+ A H S+ H + L+H
Sbjct: 116 LLSHHHHVAAPAHVHAHHVHAHHAHGGHHSH-HGHVLHH 153
>AE014297-675|AAN13385.1| 427|Drosophila melanogaster CG11094-PB,
isoform B protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 183 LTVHHTHYAGSFFIH*YHFHSRAALXXHFSNVHFNCLYH 67
L HH H A +H +H H+ A H S+ H + L+H
Sbjct: 116 LLSHHHHVAAPAHVHAHHVHAHHAHGGHHSH-HGHVLHH 153
>AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA,
isoform A protein.
Length = 549
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 183 LTVHHTHYAGSFFIH*YHFHSRAALXXHFSNVHFNCLYH 67
L HH H A +H +H H+ A H S+ H + L+H
Sbjct: 116 LLSHHHHVAAPAHVHAHHVHAHHAHGGHHSH-HGHVLHH 153
>AY058250-1|AAL13479.1| 270|Drosophila melanogaster GH01278p
protein.
Length = 270
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
WN+ D Y H + +G++TEGSLLI
Sbjct: 72 WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103
>AE013599-1368|AAM68702.1| 270|Drosophila melanogaster CG8979-PC,
isoform C protein.
Length = 270
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
WN+ D Y H + +G++TEGSLLI
Sbjct: 72 WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103
>AE013599-1367|AAM68701.1| 270|Drosophila melanogaster CG8979-PB,
isoform B protein.
Length = 270
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
WN+ D Y H + +G++TEGSLLI
Sbjct: 72 WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103
>AE013599-1366|AAF58602.1| 270|Drosophila melanogaster CG8979-PA,
isoform A protein.
Length = 270
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 120 WNESDING*RNYQHSEYGVQSIGNLTEGSLLI 215
WN+ D Y H + +G++TEGSLLI
Sbjct: 72 WNDDDTKYSLRYVHDKMLYLLLGHITEGSLLI 103
>BT021373-1|AAX33521.1| 286|Drosophila melanogaster LP02810p
protein.
Length = 286
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 259 MCSCYPIWHDCLSSRISKLPSVRFPIDCT-PYSLC 158
+C+ P W DC +++K P +C P SLC
Sbjct: 194 LCAPMPCWSDCKQPKLAKRPYRPRECECRFPLSLC 228
>AE013599-630|AAF59105.1| 286|Drosophila melanogaster CG11635-PA
protein.
Length = 286
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 259 MCSCYPIWHDCLSSRISKLPSVRFPIDCT-PYSLC 158
+C+ P W DC +++K P +C P SLC
Sbjct: 194 LCAPMPCWSDCKQPKLAKRPYRPRECECRFPLSLC 228
>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
SA protein.
Length = 1116
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 CCFGGLSYILCEINKDNLIKMNVIQ---AVKMYITKMXXESGPGMKVILMDKETTSIVSM 171
C G +Y C I + N+I+ V + A++ + + E P I T ++S+
Sbjct: 662 CAEGSATYTRCNIARSNIIESAVNKYKDAIEEWRNLIQGEETPNEDDIYNITITLKVLSI 721
Query: 172 VYSQSEILQKEVY--LFERIDSHAKWDNMN 255
+YS + E++ LF+ ++ +N++
Sbjct: 722 LYSSHNLNPWELFKSLFQDVEEAQSKENID 751
>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
protein.
Length = 1127
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 CCFGGLSYILCEINKDNLIKMNVIQ---AVKMYITKMXXESGPGMKVILMDKETTSIVSM 171
C G +Y C I + N+I+ V + A++ + + E P I T ++S+
Sbjct: 673 CAEGSATYTRCNIARSNIIESAVNKYKDAIEEWRNLIQGEETPNEDDIYNITITLKVLSI 732
Query: 172 VYSQSEILQKEVY--LFERIDSHAKWDNMN 255
+YS + E++ LF+ ++ +N++
Sbjct: 733 LYSSHNLNPWELFKSLFQDVEEAQSKENID 762
>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
protein.
Length = 1127
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 CCFGGLSYILCEINKDNLIKMNVIQ---AVKMYITKMXXESGPGMKVILMDKETTSIVSM 171
C G +Y C I + N+I+ V + A++ + + E P I T ++S+
Sbjct: 673 CAEGSATYTRCNIARSNIIESAVNKYKDAIEEWRNLIQGEETPNEDDIYNITITLKVLSI 732
Query: 172 VYSQSEILQKEVY--LFERIDSHAKWDNMN 255
+YS + E++ LF+ ++ +N++
Sbjct: 733 LYSSHNLNPWELFKSLFQDVEEAQSKENID 762
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,571,061
Number of Sequences: 53049
Number of extensions: 431556
Number of successful extensions: 703
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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