Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30338.Seq
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   1.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   2.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.5  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.2  
U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           20   9.5  

>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 277 LNLKACISVFVVVSKIDLHLLVIHNVNTCDSFSY 176
           L +  C+S FV+      H L + N N  D F+Y
Sbjct: 32  LIIAGCVSPFVIGYVKHFHPLALSNKNAID-FNY 64


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 249 KTEIQAFRFKSQEDPCYAQGSY*TRSKDQD 338
           KT+ +AF+ K   DP   +GSY  R  D++
Sbjct: 352 KTQ-KAFQVKRVPDPSKRKGSYIFRLPDEN 380


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 357 LSDLFPRLDLCFVFSKSLAH 298
           ++DL P  D C     +LAH
Sbjct: 56  ITDLDPSADYCLFLEMTLAH 75


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -3

Query: 274 NLKACISVFVVVSKIDLHLLVIHNVNTCDSF 182
           +L+ C+++  + + + + L  ++   T DSF
Sbjct: 316 SLRFCLNILSIFTYVPMILYCVYTTATYDSF 346


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -3

Query: 274 NLKACISVFVVVSKIDLHLLVIHNVNTCDSF 182
           +L+ C+++  + + + + L  ++   T DSF
Sbjct: 41  SLRFCLNILSIFTYVPMILYCVYTTATYDSF 71


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 116 LLILSLAPQAV*IAPFYLLSLILNTSLCPF 27
           LLIL      + + P+YLL  + N    PF
Sbjct: 272 LLILFSCLLHLVVTPYYLLIEVCNAGYLPF 301


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 176 VRKAIARVYIVYHQKMKVNLRNHYKNRNTSL 268
           V + +  + ++Y     V +RN   N NTSL
Sbjct: 168 VNEYVQAIEVLYICSYTVLIRNKISNLNTSL 198


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 80  IAPFYLLSLILNTSLCPF 27
           + PFY+++ +  TS C F
Sbjct: 234 LIPFYVVATLGTTSSCTF 251


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 149 ASKLSKIRVVRKAIARVYIVYH 214
           + KLSKI+ ++ A   +  +YH
Sbjct: 128 SDKLSKIQTLKLAARYIDFLYH 149


>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 10 RERDRQNGQSEVF 48
          RER R NG +E F
Sbjct: 5  RERRRMNGLNEAF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,266
Number of Sequences: 336
Number of extensions: 1200
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)