Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30335.Seq
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.25 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -3

Query: 478 FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLC-LCTH 302
           + L FS    ++     + F +++   F  SE +  +++     YFR +  +T C L T 
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTA 412

Query: 301 SSFCGIRALAVPLLL 257
             +C +    +  LL
Sbjct: 413 LVYCSLAIFVLCELL 427


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +3

Query: 162  WSRHQETCSSPLPRPCPQKHRGT*KGSSLW 251
            W++ ++ C  P    C +K  G    +S W
Sbjct: 1137 WNKERKICDWPKSAKCEEKKPGHKPSTSSW 1166


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 162 ILDHLTDVLSGVGVCDLI 109
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 586 SEGLQQFLLLGGNTFLAALACL 521
           SE ++QFL     TF+A LA L
Sbjct: 461 SEMVKQFLFTQKFTFVAGLATL 482


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -2

Query: 158 LIILRMFCLELVFAISLISFGSNHTFFLPHRITEAASLFC 39
           L I   +C  ++F + L+     + FF    I     LFC
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 524 PPLLYSAGLSLVAKHLR 474
           PP     GLSL A HL+
Sbjct: 41  PPKRAPVGLSLAASHLQ 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,259
Number of Sequences: 336
Number of extensions: 3623
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)