Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30328.Seq
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 140 4e-32
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 120 6e-26
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 110 4e-23
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 99 7e-20
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 77 6e-13
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 60 1e-07
UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog ... 50 1e-04
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 49 1e-04
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 48 2e-04
UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48... 47 5e-04
UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12; Euryar... 46 0.001
UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 46 0.001
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 46 0.002
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 45 0.002
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 44 0.004
UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5; Eurya... 43 0.009
UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 43 0.009
UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7; ... 42 0.021
UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 42 0.027
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 41 0.036
UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:... 41 0.036
UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 41 0.048
UniRef50_A3CXI0 Cluster: AAA family ATPase, CDC48 subfamily; n=3... 39 0.15
UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 39 0.19
UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4; Eur... 39 0.19
UniRef50_A4YMQ0 Cluster: Putative Vesicle-fusing ATPase; n=1; Br... 37 0.59
UniRef50_A0RUY9 Cluster: AAA ATPase; n=2; Thermoprotei|Rep: AAA ... 37 0.78
UniRef50_Q2RI39 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 36 1.0
UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1; Methanop... 36 1.0
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 36 1.4
UniRef50_Q89M26 Cluster: Bll4367 protein; n=5; Rhizobiales|Rep: ... 34 5.5
UniRef50_Q8TDL7 Cluster: Spermatogenesis associated factor; n=35... 34 5.5
UniRef50_P13398 Cluster: 6-aminohexanoate-cyclic-dimer hydrolase... 33 7.2
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 140 bits (339), Expect = 4e-32
Identities = 81/191 (42%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYC--I 175
Query: 583 LIP*YTVTVNRLNVRKKRKH*MLSAMMTS--GGCRKQLGANLRRWWSCHCVILHWFKAIG 756
+ P + ++++ + L+ + GGCRKQL A ++ FKAIG
Sbjct: 176 VAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIG 234
Query: 757 SEPPTRAFLMY 789
+PP R L+Y
Sbjct: 235 VKPP-RGILLY 244
Score = 132 bits (320), Expect = 9e-30
Identities = 72/125 (57%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTT 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIG +
Sbjct: 154 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 GRKFKEMVELPLRHPSLVQGYWE*TSHAGISHVXGRLV---PGKNTPLLVAXCQXKQGAS 860
+ KEMVELPLRHP+L + G+ G L+ PG L+ + GA
Sbjct: 214 A-QIKEMVELPLRHPALFKA-------IGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 861 SF*IN 875
F IN
Sbjct: 266 FFLIN 270
Score = 101 bits (241), Expect = 3e-20
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 120 bits (288), Expect = 6e-26
Identities = 55/78 (70%), Positives = 64/78 (82%)
Frame = +3
Query: 507 QVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQT 686
Q+RGGMRAVEFKVVETDP P+CIV+PDTVIH +G+ IKRE+EEE LN +GYDDIG +
Sbjct: 123 QIRGGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDAIKREDEEENLNEIGYDDIGGCRKQ 182
Query: 687 TGRKFKEMVELPLRHPSL 740
KEMVELPLRHP+L
Sbjct: 183 LA-SIKEMVELPLRHPAL 199
Score = 102 bits (245), Expect = 1e-20
Identities = 48/66 (72%), Positives = 62/66 (93%)
Frame = +2
Query: 59 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 238
MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1 MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59
Query: 239 RRKETV 256
+R++TV
Sbjct: 60 KRRDTV 65
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
NLF+VYL+PYF EAYRP+ + D F+ G
Sbjct: 99 NLFDVYLRPYFQEAYRPVRKGDIFQIRG 126
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 110 bits (265), Expect = 4e-23
Identities = 48/100 (48%), Positives = 63/100 (63%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CI + DD CP EKI+M D + I PC V YG RVH+L
Sbjct: 49 LVKGKKHRSTVCIAMEDDECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLL 108
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGA 522
PIDD+VE LTG+LFE +LKPYF+E+YRP+ + D+F GA
Sbjct: 109 PIDDTVENLTGDLFENFLKPYFLESYRPVKKGDSFVCRGA 148
Score = 83.0 bits (196), Expect = 9e-15
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +3
Query: 513 RGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQ 683
RG MR+VEFKVVE DP +CIV+PDT+IH +G+PI R E+EEAL+ VGYDDI L Q
Sbjct: 146 RGAMRSVEFKVVEVDPGDYCIVSPDTIIHSEGDPIHR-EDEEALDGVGYDDIWWLPQ 201
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +2
Query: 110 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETV 256
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TV
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTV 59
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 99 bits (238), Expect = 7e-20
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTT 689
VRGG +VEFKVVE DP FCIV+PDTVI+ +G+PIKR++EE+ L+ +GYDDIG +
Sbjct: 156 VRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEK-LDEIGYDDIGGCKKQL 214
Query: 690 GRKFKEMVELPLRHPSL 740
+ +EM+ELPLRHP L
Sbjct: 215 A-QIREMIELPLRHPGL 230
Score = 93.1 bits (221), Expect = 8e-18
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ CI+L+D++ + KIR+ D+V + CP + YGK++ +L
Sbjct: 59 LIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVL 118
Query: 403 PIDDSVEGLT-GNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASW 579
PIDD++EGL LFE++LKPYF E+YRP+ + D F G S K + +
Sbjct: 119 PIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGG---FMSVEFKVVEVDPDDF 175
Query: 580 LLIP*YTVTVNRLNVRKKRKH*MLSAMMTS--GGCRKQLGANLRRWWSCHCVILHWFKAI 753
++ TV + K+ L + GGC+KQL A +R FK +
Sbjct: 176 CIVSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQL-AQIREMIELPLRHPGLFKTL 234
Query: 754 GSEPPTRAFLMY 789
G +PP R L+Y
Sbjct: 235 GVKPP-RGVLLY 245
Score = 70.1 bits (164), Expect = 7e-11
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +2
Query: 65 DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 244
D K+ D + L +K RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R
Sbjct: 6 DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65
Query: 245 KETV 256
T+
Sbjct: 66 HSTI 69
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 77.0 bits (181), Expect = 6e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFK 704
R +EFKVV TDPSP CIV I +GEPI R+E E VGY D+G L + G +
Sbjct: 174 REIEFKVVLTDPSPACIVMDGGEIFYEGEPIDRDEHERENTKVGYSDLGGLGKELG-MIR 232
Query: 705 EMVELPLRHPSL 740
E +ELPLRHP L
Sbjct: 233 EQIELPLRHPEL 244
Score = 39.1 bits (87), Expect = 0.15
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 122 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
NR IV + D+S + LS K+ L LF+GD V LKG+ K T A
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHA 57
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +2
Query: 122 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TVA
Sbjct: 17 NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVA 62
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + I +S+ E + M D ++I P S+ +VHIL
Sbjct: 51 LLEGKNNKKTVAIAISNRQ-DKESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHIL 109
Query: 403 PIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHRDDTF 507
P DS+ G NL + YL PYF++AYRP+ + D F
Sbjct: 110 PFQDSISGTNEKNLTQNYLIPYFLDAYRPVSKGDCF 145
Score = 55.2 bits (127), Expect = 2e-06
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEE--EEALNAVGYDDIGRLSQTTGRK 698
+ +EFK++ T+P +V P T+++ +G +KRE E E+ N GY +IG +++
Sbjct: 151 KEIEFKIIATEPEDMGVVGPITILYTEGGTVKREIENKEQFDNQNGYANIGGMNKQL-TI 209
Query: 699 FKEMVELPLRHPSLVQGYWE*TSHAGISHVXGRLV---PGKNTPLLVAXCQXKQGASSF* 869
K +VEL LR+PS+++ +G+ + G L+ G L+V + GA+ +
Sbjct: 210 IKTIVELQLRNPSILKA-------SGLQTINGLLISGASGSGKTLIVKALAIETGANIYF 262
Query: 870 IN 875
+N
Sbjct: 263 LN 264
>UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog
MJ1156; n=64; cellular organisms|Rep: Cell division
cycle protein 48 homolog MJ1156 - Methanococcus
jannaschii
Length = 903
Score = 49.6 bits (113), Expect = 1e-04
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +3
Query: 528 AVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKE 707
A+ F VV T P+ V T + EP+ E +E + V Y+DIG L + +K +E
Sbjct: 136 ALTFVVVSTTPAGPVRVTDFTHVELKEEPVS-EIKETKVPDVTYEDIGGLKEEV-KKVRE 193
Query: 708 MVELPLRHPSLVQGYWE*TSHAGISHVXGRLV---PGKNTPLLVAXCQXKQGASSF*IN 875
M+ELP+RHP L + GI G L+ PG LL + GA+ + IN
Sbjct: 194 MIELPMRHPELFE-------KLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVIN 245
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 573 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSLVQGY 752
++ ++VI G + RE +++ VGYDDIG +++ K +E++ELPL HP L +
Sbjct: 336 LIVGESVIDSSGNYLTRENHDDSYGEVGYDDIGGMNKQLS-KIRELIELPLLHPELFK-- 392
Query: 753 WE*TSHAGISHVXGRLV---PGKNTPLLVAXCQXKQGASSF*IN 875
GI+ G ++ PG L+ + GA + IN
Sbjct: 393 -----TVGINPPKGVILHGPPGSGKTLVARAIANETGAKCYVIN 431
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 573 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSLVQGY 752
+++ ++V+ C G + RE+ + + +GYD+IG + + K +E++ELPL HP + +
Sbjct: 332 LISGESVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLS-KIRELIELPLLHPEVYKA- 389
Query: 753 WE*TSHAGISHVXGRLV---PGKNTPLLVAXCQXKQGASSF*IN 875
GIS G ++ PG L+ + GA IN
Sbjct: 390 ------VGISPPKGVILHGPPGTGKTLIARAIASETGAHCVVIN 427
>UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48;
n=1; uncultured methanogenic archaeon RC-I|Rep: Putative
cell division cycle protein 48 - Uncultured methanogenic
archaeon RC-I
Length = 942
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +3
Query: 537 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVE 716
F V T P+ I T + +P++ E+ E+ + + Y+DIG L + G +EM+E
Sbjct: 142 FVVTNTRPAGTVIADMSTEVTISEKPVEAEKAEKTPH-ISYEDIGGLRREIGL-VREMIE 199
Query: 717 LPLRHPSLVQ 746
LPLRHP L Q
Sbjct: 200 LPLRHPELFQ 209
>UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12;
Euryarchaeota|Rep: ATPase of the AAA+ family -
Pyrococcus abyssi
Length = 840
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 519 GMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRK 698
G ++F VV T P + +T + + + E EE + V Y+DIG L + K
Sbjct: 167 GFGELKFMVVNTIPKGIVQITYNTEVEVLPQAV--EVREEKIPEVTYEDIGGLKEAI-EK 223
Query: 699 FKEMVELPLRHPSLVQ 746
+EMVELPL+HP L +
Sbjct: 224 IREMVELPLKHPELFE 239
>UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Caldivirga maquilingensis IC-167|Rep: AAA family ATPase,
CDC48 subfamily - Caldivirga maquilingensis IC-167
Length = 852
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +3
Query: 528 AVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKE 707
A++F + + P+P V +T + +P+ +E L V ++DIG L + +K +E
Sbjct: 140 ALKFMITQVIPAPAAYVGTETEVTMQDKPV----QETNLPRVTWEDIGDLEEAK-QKIRE 194
Query: 708 MVELPLRHPSL 740
+VELPL+HP L
Sbjct: 195 LVELPLKHPEL 205
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 573 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSL 740
++ ++VI G + RE+++ + VGYDDIG +++ K +E++ELPL HP L
Sbjct: 312 LIVGESVIDSGGNYLSREDDD-SFGEVGYDDIGGMNKQLS-KIRELIELPLLHPEL 365
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 119 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE +A
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLA 317
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +3
Query: 576 VAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSL 740
V + +I D E + RE+ EE + + Y+D+G + + K +E++ELPL++P +
Sbjct: 448 VGDNAIITLDEEYLNREDYEEHTDDITYEDLGGMKKQL-NKIRELIELPLKYPEI 501
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFK 704
R +EFKVV P I+ VI +PI RE + V YD IG L + + +
Sbjct: 140 RVIEFKVVNCSPEEEVIIQDKEVILYRNQPIHRENIN--FSTVSYDSIGGLHKQID-QIR 196
Query: 705 EMVELPLRHPSLVQGY 752
+++E PL P LV +
Sbjct: 197 KLIEFPLLQPKLVSSF 212
>UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5;
Euryarchaeota|Rep: Cell division cycle protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 759
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +3
Query: 531 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKR--------EEEEEALNAVGYDDIGRLSQT 686
+ K+ ET+PS +V+ DT I P + E + V Y+DIG L
Sbjct: 145 IPVKIAETEPSGTVVVSNDTEIQLSERPAEEIAPGAGEAAETGDPTPNVTYEDIGGLDGE 204
Query: 687 TGRKFKEMVELPLRHPSLVQ 746
+ +EM+ELP+RHP L Q
Sbjct: 205 L-EQVREMIELPMRHPELFQ 223
>UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanocorpusculum labreanum Z|Rep: AAA family ATPase,
CDC48 subfamily - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 826
Score = 43.2 bits (97), Expect = 0.009
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +3
Query: 531 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEM 710
+EFKV +P CI+ T + ++E + A+ Y+DIG L ++ +EM
Sbjct: 141 LEFKVSAIEPENACILNKMTEL-----VFNDDDEFDGTKAITYEDIGGLKGEL-KRVREM 194
Query: 711 VELPLRHPSLVQ 746
+ELP+RHP L +
Sbjct: 195 IELPIRHPELFE 206
>UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7;
cellular organisms|Rep: Cell division control protein 48
- Methanosarcina acetivorans
Length = 753
Score = 41.9 bits (94), Expect = 0.021
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +3
Query: 537 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVE 716
F V T P+ +V DT I + I EE + + Y+DIG L + + +EM+E
Sbjct: 138 FVVASTRPAGPVVVTKDTEIVIKEKSI---EEIKTPEGISYEDIGGLRREI-QLVREMIE 193
Query: 717 LPLRHPSLVQ 746
LP+RHP L Q
Sbjct: 194 LPMRHPELFQ 203
>UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=15;
cellular organisms|Rep: AAA family ATPase, CDC48
subfamily - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 773
Score = 41.5 bits (93), Expect = 0.027
Identities = 29/95 (30%), Positives = 44/95 (46%)
Frame = +3
Query: 456 EAVLHGGLPSDPS*RHLQVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEE 635
+ V G +P P R + E +++ SP +V D + P +E +
Sbjct: 141 QRVSAGDMP--PQLRQMLNAPAYALAEVRLLVVSASPKGVVTIDENTEVELLPEYQEPHD 198
Query: 636 EALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSL 740
V YDD+G L +T + +EMVELPLR+P L
Sbjct: 199 ARRTDVTYDDLGGLGETIDQ-LREMVELPLRYPEL 232
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 41.1 bits (92), Expect = 0.036
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 119 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE VA
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVA 148
Score = 37.1 bits (82), Expect = 0.59
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 615 IKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSL 740
+ RE+ EE + + Y+D+G + + K +E++ELPL++P +
Sbjct: 274 LNREDYEENTDDINYEDLGGMKKQLN-KIRELIELPLKYPEI 314
>UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:
NEQ475 - Nanoarchaeum equitans
Length = 826
Score = 41.1 bits (92), Expect = 0.036
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 522 MRAVEFKVVETDPSPF-CIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRK 698
++ + FKVV T+P I+ DT+I IK +E + V Y+DIG + +K
Sbjct: 150 LKEMWFKVVSTNPPKGPVIIGRDTIIE-----IKPGGVQE-IPEVTYEDIGGMKDVI-QK 202
Query: 699 FKEMVELPLRHPSLVQ 746
+E+VELPLRHP + +
Sbjct: 203 VRELVELPLRHPEIFE 218
>UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanospirillum hungatei JF-1|Rep: AAA family ATPase,
CDC48 subfamily - Methanospirillum hungatei (strain JF-1
/ DSM 864)
Length = 801
Score = 40.7 bits (91), Expect = 0.048
Identities = 23/72 (31%), Positives = 39/72 (54%)
Frame = +3
Query: 531 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEM 710
V F V +P +V T + + P + EE++ ++ Y+DIG LS+ +EM
Sbjct: 139 VTFIVSSLEPRGTGVVTFTTEVILNDTPYQTEEKKSEELSIHYEDIGGLSREISL-IREM 197
Query: 711 VELPLRHPSLVQ 746
VE+PLR+P + +
Sbjct: 198 VEIPLRYPRIFE 209
>UniRef50_A3CXI0 Cluster: AAA family ATPase, CDC48 subfamily; n=3;
Methanomicrobiales|Rep: AAA family ATPase, CDC48
subfamily - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 805
Score = 39.1 bits (87), Expect = 0.15
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 531 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEM 710
V FK V +P I+ +T I +P E + + Y+DIG L R +E
Sbjct: 144 VAFKAVVVEPENAVIITKNTKIEFSEKPAAGFE---GVKRISYEDIGGLKGELQR-VRET 199
Query: 711 VELPLRHPSL 740
+ELP+RHP +
Sbjct: 200 IELPMRHPEI 209
>UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Thermosinus carboxydivorans Nor1|Rep: AAA family ATPase,
CDC48 subfamily - Thermosinus carboxydivorans Nor1
Length = 720
Score = 38.7 bits (86), Expect = 0.19
Identities = 32/102 (31%), Positives = 49/102 (48%)
Frame = +3
Query: 435 QSIRSILEAVLHGGLPSDPS*RHLQVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEP 614
Q IR LE +L+G LP + G RA F V+ T P ++ T I
Sbjct: 113 QDIRH-LERLLNG-LPVIIGDKIKVTLAGARAQYFTVIGTSPQGPVVINAATKITVT--- 167
Query: 615 IKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSL 740
K + +E+ Y+D+G L + R +EM+ELPL++P +
Sbjct: 168 -KPDVQEDMSYCASYEDVGGLDKELQR-IREMIELPLKYPEV 207
>UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4;
Euryarchaeota|Rep: Cell division control protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 792
Score = 38.7 bits (86), Expect = 0.19
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTV-IHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKF 701
+ + VETDP+ ++ +T I +P++ E+ Y+DIG L R
Sbjct: 153 QVIPLVAVETDPANTIVLITETTNIELRKKPVQGYEKATR-GVTTYEDIGGLGDEIMR-V 210
Query: 702 KEMVELPLRHPSL 740
+EM+E+P++HP L
Sbjct: 211 REMIEMPMKHPEL 223
>UniRef50_A4YMQ0 Cluster: Putative Vesicle-fusing ATPase; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative Vesicle-fusing
ATPase - Bradyrhizobium sp. (strain ORS278)
Length = 714
Score = 37.1 bits (82), Expect = 0.59
Identities = 30/99 (30%), Positives = 50/99 (50%)
Frame = +3
Query: 450 ILEAVLHGGLPSDPS*RHLQVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREE 629
++ A+ H + + S R L + GG + +V T PS ++ +T + I E
Sbjct: 121 VVAALEHIPITAGDSIR-LPLMGG-NSTSCEVTATRPSGPVLITTETRLD-----ISARE 173
Query: 630 EEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSLVQ 746
+A ++ Y+D+G + Q R +EMVELPLR P L +
Sbjct: 174 VGDADRSITYEDLGGVDQELQR-VREMVELPLRQPELFE 211
>UniRef50_A0RUY9 Cluster: AAA ATPase; n=2; Thermoprotei|Rep: AAA
ATPase - Cenarchaeum symbiosum
Length = 724
Score = 36.7 bits (81), Expect = 0.78
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +3
Query: 528 AVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKE 707
+++FK+ +T P + T + I E E V Y+++G L R +E
Sbjct: 141 SIDFKIGKTTPRSVVRMDRSTSLS-----ILTEAPESKKARVTYEEVGGLESEI-RAMRE 194
Query: 708 MVELPLRHPSLVQGYWE*TSHAGI 779
+VELPLRHP L SH+GI
Sbjct: 195 IVELPLRHPELFSRLGV-ESHSGI 217
>UniRef50_Q2RI39 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Moorella thermoacetica ATCC 39073|Rep: AAA family
ATPase, CDC48 subfamily - Moorella thermoacetica (strain
ATCC 39073)
Length = 730
Score = 36.3 bits (80), Expect = 1.0
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +3
Query: 507 QVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQT 686
Q GG A F V P ++ DT + G E E V Y+DIG L++
Sbjct: 137 QFSGGDEA--FTVEGAAPRGAVVITRDTAVRFKGG----EATEGRGQRVTYEDIGGLARE 190
Query: 687 TGRKFKEMVELPLRHPSLVQ 746
R +E++ELPL++P L Q
Sbjct: 191 VQR-VREIIELPLKYPQLFQ 209
>UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1;
Methanopyrus kandleri|Rep: ATPase of the AAA+ class -
Methanopyrus kandleri
Length = 1249
Score = 36.3 bits (80), Expect = 1.0
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Frame = +3
Query: 543 VVETDPSPFCIVAPDTVIHCDGEPIKREEEEEA-LNAVGYDDIGRLSQTTGRKFKEMVEL 719
VV +P ++ P+T I +P + + A + V YDDIG L + +E VEL
Sbjct: 177 VVGIEPEDATVIGPETEIEV--KPYSEDLAKAAEIPDVTYDDIGGLDREI-ELIREYVEL 233
Query: 720 PLRHPSLVQGYWE*TSHAGISHVXGRLV---PGKNTPLLVAXCQXKQGASSF*IN 875
PL+ P L++ GI G L+ PG LL + GA + IN
Sbjct: 234 PLKRPELLK-------ELGIKPPKGVLLYGPPGTGKTLLAKAVANECGAKFYSIN 281
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 35.9 bits (79), Expect = 1.4
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Frame = +3
Query: 516 GGMRAVEFKVVETDPS-----PFCIVAPDTVIHCDGEPIKR----------EEEEEALNA 650
G VE KV++ D +V T + C+GEP+ R + +A +
Sbjct: 137 GATGKVEVKVMQIDTDGKDDQEVALVDDATELICEGEPLDRAVIFCVAPLPSAQFDASSM 196
Query: 651 VGYDDIGRLSQTTGRKFKEMVELPLRHPSL 740
+ YDD+G L + +E+VELPLR P +
Sbjct: 197 ITYDDVGGLKKELNL-IRELVELPLRFPEI 225
Score = 33.9 bits (74), Expect = 5.5
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 188 MEQLQLFRGDTVLLKGKRRKETVA 259
M LQ+ RGD VLL G+R++ETVA
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVA 24
>UniRef50_Q89M26 Cluster: Bll4367 protein; n=5; Rhizobiales|Rep:
Bll4367 protein - Bradyrhizobium japonicum
Length = 323
Score = 33.9 bits (74), Expect = 5.5
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = +3
Query: 576 VAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSLVQGYW 755
++PD V+ PI ++ L G TTGR+ K M+E ++ P +
Sbjct: 85 LSPDNVVLEQNSPIVNTGDKLILFDTGMGSSKMFGPTTGRQQKSMMEAGIK-PEDIDAVV 143
Query: 756 E*TSHAGISHVXGRLVPGKNTPL 824
SHA I H+ G +V N PL
Sbjct: 144 --CSHAHIDHIGG-IVDANNKPL 163
>UniRef50_Q8TDL7 Cluster: Spermatogenesis associated factor; n=35;
Eumetazoa|Rep: Spermatogenesis associated factor - Homo
sapiens (Human)
Length = 893
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHPSLVQGY 752
K +E++ V YD IG LS + +E++ELPL+ P L + Y
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQL-KAIREIIELPLKQPELFKSY 382
>UniRef50_P13398 Cluster: 6-aminohexanoate-cyclic-dimer hydrolase;
n=2; Bacteria|Rep: 6-aminohexanoate-cyclic-dimer
hydrolase - Pseudomonas sp. (strain NK87)
Length = 493
Score = 33.5 bits (73), Expect = 7.2
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 555 DPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGRLSQTTGRKFKEMVELPLRHP 734
D S C VA I +GE I R E+ + ++ + R Q TGR F V+ +
Sbjct: 311 DYSTICDVAIAREIERNGELIGRPLTEDDVEWTSWEMVKRADQVTGRAFAACVDELRYYA 370
Query: 735 SLVQGYWE 758
V+ +WE
Sbjct: 371 GKVERWWE 378
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,861,321
Number of Sequences: 1657284
Number of extensions: 19002400
Number of successful extensions: 50220
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 47985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50198
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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