Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30323.Seq
         (967 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   1.1  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   3.4  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    25   4.5  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    25   4.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   4.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   7.8  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 319  RQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPP 420
            R++  +R +E  +L  EA  A +  N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 724 WKGQSVRAXFAITPSWRKGD 665
           WK +S  A  ++T +W++GD
Sbjct: 33  WKFESTAAPESLTETWKEGD 52


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
           subunit AgOn protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 693 LLXPAGERGMCC--KAIKLGNAQGFPSHDVVKRRPVNCNTT 577
           LL  AGE G     K +K+ +  GF S D  + RPV  + T
Sbjct: 24  LLLGAGESGKSTIVKQMKIIHESGFTSEDFKQYRPVVYSNT 64


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
           subunit AgOa protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 693 LLXPAGERGMCC--KAIKLGNAQGFPSHDVVKRRPVNCNTT 577
           LL  AGE G     K +K+ +  GF S D  + RPV  + T
Sbjct: 24  LLLGAGESGKSTIVKQMKIIHESGFTSEDFKQYRPVVYSNT 64


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 304 KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 447
           KH  C  +     +E +++ KEA    +T+NL +     +A  +  GT
Sbjct: 323 KHRLCELNREPTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGT 370


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 560  GYRAPPRSFFXVXXFLKNFIGLYATN 483
            GYRA    FF    +  NF+GL  TN
Sbjct: 1816 GYRA---RFFADQSYFNNFVGLCGTN 1838


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 993,017
Number of Sequences: 2352
Number of extensions: 20145
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)