Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30321.Seq
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    26   1.4  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    26   1.4  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    25   2.4  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.4  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   3.1  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    24   5.5  

>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 569 NGDGSVSTTLNS-TARMPPRTRRCRHDG 489
           +G+G+ S+  NS   R PP   RCR+ G
Sbjct: 21  DGNGAASSCNNSLNPRTPPNCARCRNHG 48


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 569 NGDGSVSTTLNS-TARMPPRTRRCRHDG 489
           +G+G+ S+  NS   R PP   RCR+ G
Sbjct: 21  DGNGAASSCNNSLNPRTPPNCARCRNHG 48


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 569 NGDGSVSTTLNS-TARMPPRTRRCRHDG 489
           +G+G+ S+  NS   R PP   RCR+ G
Sbjct: 21  DGNGASSSCNNSLNPRTPPNCARCRNHG 48


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 569 NGDGSVSTTLNS-TARMPPRTRRCRHDG 489
           +G+G+ S+  NS   R PP   RCR+ G
Sbjct: 21  DGNGASSSCNNSLNPRTPPNCARCRNHG 48


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 84  IYRPRSSVARTDPTVSLSKKQSAMTTQSW 170
           +Y+  S+V RTD   ++ K++   T + W
Sbjct: 849 VYQRLSAVNRTDTRANIRKQERQATIEQW 877


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 601 VYYGIRSPRCKMVMDLFRPL 542
           +YY IRSP C+ V+ L R L
Sbjct: 3   LYYHIRSPPCQPVVFLARHL 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,710
Number of Sequences: 2352
Number of extensions: 16512
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)