Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30321.Seq
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 244 5e-64
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 244 5e-64
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 244 5e-64
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 244 5e-64
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 244 5e-64
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 161 3e-39
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 88 4e-17
AB065574-1|BAC05807.1| 337|Homo sapiens seven transmembrane hel... 33 1.9
Z98880-5|CAI42377.1| 145|Homo sapiens vestigial like 2 (Drosoph... 31 5.7
Z98880-4|CAI42376.1| 143|Homo sapiens vestigial like 2 (Drosoph... 31 5.7
BC118622-1|AAI18623.1| 143|Homo sapiens vestigial like 2 (Droso... 31 5.7
BC118545-1|AAI18546.1| 143|Homo sapiens vestigial like 2 (Droso... 31 5.7
BC100799-1|AAI00800.1| 143|Homo sapiens vestigial like 2 (Droso... 31 5.7
BC100798-1|AAI00799.1| 143|Homo sapiens vestigial like 2 (Droso... 31 5.7
BC069316-1|AAH69316.1| 143|Homo sapiens vestigial like 2 (Droso... 31 5.7
AY056583-1|AAL17720.1| 143|Homo sapiens transcription cofactor ... 31 5.7
AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens ... 31 5.7
AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein. 31 5.7
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 244 bits (596), Expect = 5e-64
Identities = 140/270 (51%), Positives = 167/270 (61%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETVASCSQTIIALMRKFG*TVLXXTNFGXXXPXGEPXVXGPSVKYGKRVHILPIXDSX 421
R+E V K + N P VKYGKR+H+LPI D+
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123
Query: 422 EGLTGNLFEVYLKPYFMXAYRPIHRDDTFWSAGACAPSSSKWSKQIHHHFASWAPDTVIH 601
EG+TGNLFEVYLKPYF+ AYRPI + D F G K + + APDTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIH 183
Query: 602 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATXSXLHXSKAIXGEASXXAF 781
C+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M KAI G
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA-LFKAI-GVKPPRGI 241
Query: 782 LHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
L ++G K IARAVA FFL N
Sbjct: 242 L-LYGPPGTGKTLIARAVANETGAFFFLIN 270
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 244 bits (596), Expect = 5e-64
Identities = 140/270 (51%), Positives = 167/270 (61%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETVASCSQTIIALMRKFG*TVLXXTNFGXXXPXGEPXVXGPSVKYGKRVHILPIXDSX 421
R+E V K + N P VKYGKR+H+LPI D+
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123
Query: 422 EGLTGNLFEVYLKPYFMXAYRPIHRDDTFWSAGACAPSSSKWSKQIHHHFASWAPDTVIH 601
EG+TGNLFEVYLKPYF+ AYRPI + D F G K + + APDTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 602 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATXSXLHXSKAIXGEASXXAF 781
C+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M KAI G
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA-LFKAI-GVKPPRGI 241
Query: 782 LHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
L ++G K IARAVA FFL N
Sbjct: 242 L-LYGPPGTGKTLIARAVANETGAFFFLIN 270
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 244 bits (596), Expect = 5e-64
Identities = 140/270 (51%), Positives = 167/270 (61%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETVASCSQTIIALMRKFG*TVLXXTNFGXXXPXGEPXVXGPSVKYGKRVHILPIXDSX 421
R+E V K + N P VKYGKR+H+LPI D+
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123
Query: 422 EGLTGNLFEVYLKPYFMXAYRPIHRDDTFWSAGACAPSSSKWSKQIHHHFASWAPDTVIH 601
EG+TGNLFEVYLKPYF+ AYRPI + D F G K + + APDTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 602 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATXSXLHXSKAIXGEASXXAF 781
C+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M KAI G
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA-LFKAI-GVKPPRGI 241
Query: 782 LHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
L ++G K IARAVA FFL N
Sbjct: 242 L-LYGPPGTGKTLIARAVANETGAFFFLIN 270
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 244 bits (596), Expect = 5e-64
Identities = 140/270 (51%), Positives = 167/270 (61%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETVASCSQTIIALMRKFG*TVLXXTNFGXXXPXGEPXVXGPSVKYGKRVHILPIXDSX 421
R+E V K + N P VKYGKR+H+LPI D+
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123
Query: 422 EGLTGNLFEVYLKPYFMXAYRPIHRDDTFWSAGACAPSSSKWSKQIHHHFASWAPDTVIH 601
EG+TGNLFEVYLKPYF+ AYRPI + D F G K + + APDTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 602 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATXSXLHXSKAIXGEASXXAF 781
C+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M KAI G
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA-LFKAI-GVKPPRGI 241
Query: 782 LHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
L ++G K IARAVA FFL N
Sbjct: 242 L-LYGPPGTGKTLIARAVANETGAFFFLIN 270
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 244 bits (596), Expect = 5e-64
Identities = 140/270 (51%), Positives = 167/270 (61%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETVASCSQTIIALMRKFG*TVLXXTNFGXXXPXGEPXVXGPSVKYGKRVHILPIXDSX 421
R+E V K + N P VKYGKR+H+LPI D+
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123
Query: 422 EGLTGNLFEVYLKPYFMXAYRPIHRDDTFWSAGACAPSSSKWSKQIHHHFASWAPDTVIH 601
EG+TGNLFEVYLKPYF+ AYRPI + D F G K + + APDTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 602 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATXSXLHXSKAIXGEASXXAF 781
C+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M KAI G
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA-LFKAI-GVKPPRGI 241
Query: 782 LHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
L ++G K IARAVA FFL N
Sbjct: 242 L-LYGPPGTGKTLIARAVANETGAFFFLIN 270
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 161 bits (391), Expect = 3e-39
Identities = 90/168 (53%), Positives = 103/168 (61%)
Frame = +2
Query: 368 PSVKYGKRVHILPIXDSXEGLTGNLFEVYLKPYFMXAYRPIHRDDTFWSAGACAPSSSKW 547
P VKYGKR+H+LPI D+ EG+TGNLFEVYLKPYF+ AYRPI + D F G K
Sbjct: 44 PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV 103
Query: 548 SKQIHHHFASWAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATX 727
+ + APDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M
Sbjct: 104 VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR 163
Query: 728 SXLHXSKAIXGEASXXAFLHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
KAI G L ++G K IARAVA FFL N
Sbjct: 164 HPA-LFKAI-GVKPPRGIL-LYGPPGTGKTLIARAVANETGAFFFLIN 208
Score = 70.9 bits (166), Expect = 6e-12
Identities = 47/108 (43%), Positives = 50/108 (46%)
Frame = +1
Query: 256 CIVLSDDNCPDEKIRMNRVVXNXLRXXXXXXXXXXXXXXXEIWKTSPHTAN*XFX*GSYW 435
CIVLSDD C DEKIRMNRVV N LR + K G
Sbjct: 7 CIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITG 66
Query: 436 QSIRSILEAVLHGGLPSDPS*RHLLVRGGMRAVEFKVVETDPSPFCIV 579
L+ LVRGGMRAVEFKVVETDPSP+CIV
Sbjct: 67 NLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIV 114
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 88.2 bits (209), Expect = 4e-17
Identities = 54/97 (55%), Positives = 59/97 (60%)
Frame = +2
Query: 581 APDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIXGMGGXATXSXLHXSKAIXG 760
APDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI M KAI G
Sbjct: 15 APDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA-LFKAI-G 72
Query: 761 EASXXAFLHVWGXLVPXKHPIARAVAXWKXGAFFLFN 871
L ++G K IARAVA FFL N
Sbjct: 73 VKPPRGIL-LYGPPGTGKTLIARAVANETGAFFFLIN 108
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 538 FKVVETDPSPFCIV 579
FKVVETDPSP+CIV
Sbjct: 1 FKVVETDPSPYCIV 14
>AB065574-1|BAC05807.1| 337|Homo sapiens seven transmembrane helix
receptor protein.
Length = 337
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 441 YSKYT*SRTSWXLTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRG 581
Y++ ++ +W L+ R++ PSG R +RR +SG+ RS++ + +G
Sbjct: 24 YTRSCPTQRAWTLSHRALTVQPSGKRSGVQRR-KSGQPRSLSTMAQG 69
>Z98880-5|CAI42377.1| 145|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 145
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>Z98880-4|CAI42376.1| 143|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>BC118622-1|AAI18623.1| 143|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>BC118545-1|AAI18546.1| 143|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>BC100799-1|AAI00800.1| 143|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>BC100798-1|AAI00799.1| 143|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>BC069316-1|AAH69316.1| 143|Homo sapiens vestigial like 2
(Drosophila) protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>AY056583-1|AAL17720.1| 143|Homo sapiens transcription cofactor
vestigial-like 2 protein protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ39559 fis, clone SKMUS2000701, weakly similar to
VESTIGIAL PROTEIN. ).
Length = 317
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
>AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein.
Length = 317
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 440 LFEVY--LKPYFMXAYRPIHRDDTFWS----AGACAPSSSKWSKQIHHHFASWAPDTVIH 601
+++VY +PYF AY P H+ ++S A C S S S F+S P ++
Sbjct: 7 MYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSS-SGSGSSSFSSQTPASIKE 65
Query: 602 CDGEPIK-REEEEEALNA 652
+G P K R E E +N+
Sbjct: 66 EEGSPEKERPPEAEYINS 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,407,329
Number of Sequences: 237096
Number of extensions: 2450100
Number of successful extensions: 5009
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4980
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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