Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30318.Seq
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 133 2e-31
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 133 2e-31
08_02_0657 - 19749835-19751942,19753123-19753561 99 6e-21
09_06_0271 + 21959213-21960559 46 4e-05
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 43 4e-04
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 42 5e-04
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 42 5e-04
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 40 0.003
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 40 0.004
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 39 0.006
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 39 0.006
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 38 0.015
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 38 0.015
04_03_0179 - 12304726-12304782,12305509-12305601,12305729-123058... 37 0.020
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 33 0.32
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 33 0.42
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 33 0.42
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 31 1.7
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 31 1.7
06_01_0057 - 483710-484309 29 5.2
08_02_1494 + 27523016-27524040,27524971-27525118 28 9.1
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 28 9.1
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 9.1
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 133 bits (321), Expect = 2e-31
Identities = 71/125 (56%), Positives = 84/125 (67%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE L+ VGYDD+GG RKQ+
Sbjct: 161 VRGGMRSVEFKVIETDPTEYCIVAPDTEIFCDGEPIKREDEER-LDEVGYDDVGGVRKQM 219
Query: 690 AQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQLXTGAFLLXKLMG 869
AQI+E VELPLRH ++IGVK +G GKT TGAF + G
Sbjct: 220 AQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN-ETGAFFFL-ING 277
Query: 870 PGFXS 884
P S
Sbjct: 278 PEIMS 282
Score = 115 bits (277), Expect = 5e-26
Identities = 52/99 (52%), Positives = 66/99 (66%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVL+D+ C + KIRM DVVS+ C VKYGKRVHIL
Sbjct: 65 LLKGKKRKDTICIVLADETCEEPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKRVHIL 124
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLF+ +LKPYF+EAYRP+ + D F G
Sbjct: 125 PIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRG 163
Score = 93.1 bits (221), Expect = 3e-19
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD K D STAIL RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+
Sbjct: 11 ADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKK 70
Query: 242 RKETV 256
RK+T+
Sbjct: 71 RKDTI 75
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 133 bits (321), Expect = 2e-31
Identities = 71/125 (56%), Positives = 84/125 (67%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE L+ VGYDD+GG RKQ+
Sbjct: 161 VRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEER-LDEVGYDDVGGVRKQM 219
Query: 690 AQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQLXTGAFLLXKLMG 869
AQI+E VELPLRH ++IGVK +G GKT TGAF + G
Sbjct: 220 AQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN-ETGAFFFL-ING 277
Query: 870 PGFXS 884
P S
Sbjct: 278 PEIMS 282
Score = 120 bits (288), Expect = 2e-27
Identities = 54/99 (54%), Positives = 67/99 (67%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVL+DD C + KIRM DVVS+ CP VKYGKRVHIL
Sbjct: 65 LLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHIL 124
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLF+ +LKPYF+EAYRP+ + D F G
Sbjct: 125 PIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRG 163
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
+D K D STAIL RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+
Sbjct: 11 SDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKK 70
Query: 242 RKETV 256
RK+T+
Sbjct: 71 RKDTI 75
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 98.7 bits (235), Expect = 6e-21
Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPF-CIVAPDTVIHCD-GEPIKREEEEEALNAVGYDDIGGCRK 683
VRG M AVEFKV++T+P+ IVA DT I CD G+P+KRE+EE L+ GYDD+GG RK
Sbjct: 164 VRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVKREDEER-LDGPGYDDVGGVRK 222
Query: 684 QLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKT 806
QLAQI+E VELPLRH + +GV+ +G GKT
Sbjct: 223 QLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKT 263
Score = 93.9 bits (223), Expect = 2e-19
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +1
Query: 256 CIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTG 435
C D++CPD ++R+ D+V++ PCP+++ KRV + P DDSVEG++G
Sbjct: 79 CYAQKDESCPDGRLRLSRGVRSNLHVRLGDLVTVKPCPTIRNAKRVQLRPFDDSVEGISG 138
Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
+LFE YLKPYFM+A RP+ + D F G
Sbjct: 139 DLFEPYLKPYFMDALRPVKKGDRFLVRG 166
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +2
Query: 83 DLSTAILR--RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 247
D STAIL +K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+
Sbjct: 16 DYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRR 75
Query: 248 ETV 256
E V
Sbjct: 76 EAV 78
>09_06_0271 + 21959213-21960559
Length = 448
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/66 (39%), Positives = 31/66 (46%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQ 830
V YDDIGGC Q +++E VELPL H A GV G L GKT +
Sbjct: 187 VAYDDIGGCEAQKREVREAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTMLAKAVAR 246
Query: 831 LXTGAF 848
+ AF
Sbjct: 247 ETSAAF 252
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQ 830
V Y DIGGC Q +I+E VELPL H + IG+ +G GKT
Sbjct: 112 VTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 171
Query: 831 LXTGAFL 851
T AF+
Sbjct: 172 HTTAAFI 178
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKT-------XHC 815
YD IGG +Q+ +IKE +ELP++H ++G+ +G GKT H
Sbjct: 187 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 246
Query: 816 SCXLQLXTGAFLLXKLMGPG 875
C +G+ L+ K +G G
Sbjct: 247 DCTFIRVSGSELVQKYIGEG 266
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKT-------XHC 815
YD IGG +Q+ +IKE +ELP++H ++G+ +G GKT H
Sbjct: 165 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 224
Query: 816 SCXLQLXTGAFLLXKLMGPG 875
C +G+ L+ K +G G
Sbjct: 225 DCTFIRVSGSELVQKYIGEG 244
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 39.9 bits (89), Expect = 0.003
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = +3
Query: 567 FCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEXVELPLRHLHCSRA 746
F +++ ++ + +P+ + E Y DIGG Q+ +IKE VELPL H
Sbjct: 176 FQVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYED 235
Query: 747 IGVKLXGDSHXWGXLVXGKTXHCSCXLQLXTGAFL 851
IG++ +G GKT + FL
Sbjct: 236 IGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFL 270
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 39.5 bits (88), Expect = 0.004
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGD 770
++ + +P+ + E Y DIGG Q+ +IKE VELPL H IG++
Sbjct: 206 ILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKG 265
Query: 771 SHXWGXLVXGKTXHCSCXLQLXTGAFL 851
+G GKT + FL
Sbjct: 266 VILYGEPGTGKTLLAKAVANSTSATFL 292
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKT 806
V Y+D+GGC++Q+ +++E VELP+ H +G+ +G GKT
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKT 806
V Y+D+GGC++Q+ +++E VELP+ H +G+ +G GKT
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 37.5 bits (83), Expect = 0.015
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQLX 836
Y+DIGG KQ+ ++ E + LP+ H + +G++ +G GKT
Sbjct: 161 YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 220
Query: 837 TGAFLLXKLMGP 872
FL KL GP
Sbjct: 221 NATFL--KLAGP 230
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 37.5 bits (83), Expect = 0.015
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQLX 836
Y+DIGG KQ+ ++ E + LP+ H + +G++ +G GKT
Sbjct: 164 YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 223
Query: 837 TGAFLLXKLMGP 872
FL KL GP
Sbjct: 224 NATFL--KLAGP 233
>04_03_0179 -
12304726-12304782,12305509-12305601,12305729-12305833,
12306715-12306793,12307297-12307415,12307728-12307919,
12308158-12308277,12309542-12309613,12310157-12310246,
12310402-12310485
Length = 336
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKTXHCSCXLQLX 836
Y IGG KQ+ ++ E V LP+ H +C + +G+ +G GKT
Sbjct: 113 YCGIGGLEKQIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAFASQT 172
Query: 837 TGAFLLXKLMGP 872
FL KL GP
Sbjct: 173 NATFL--KLTGP 182
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGX 788
+P+ E V Y +GG Q+ +++E +ELPL + +G+K +G
Sbjct: 123 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 182
Query: 789 LVXGKT 806
GKT
Sbjct: 183 PGTGKT 188
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 32.7 bits (71), Expect = 0.42
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 654 GYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGXLVXGKT 806
G++D+GG + + IKE +ELP ++ + V+L + +G GKT
Sbjct: 790 GWEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVRLRSNILLYGPSGCGKT 840
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 32.7 bits (71), Expect = 0.42
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGVKLXGDSHXWGX 788
+P+ E V Y +GG Q+ +++E +ELPL + +G+K +G
Sbjct: 124 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPKLFLRVGIKPPKGVLLYGP 183
Query: 789 LVXGKT 806
GKT
Sbjct: 184 PGTGKT 189
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGV 755
AV +DDIGG + ++++ VE P++H +G+
Sbjct: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGI 169
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEXVELPLRHLHCSRAIGV 755
AV +DDIGG + ++++ VE P++H +G+
Sbjct: 222 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGI 257
>06_01_0057 - 483710-484309
Length = 199
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 87 YRPRSSVARTDPTVSLSKKQSAMTTQS-WHFHRPKWSNFNSSVVTQSCSR 233
Y P ART P ++ + A S W F WS+ S V+T+ SR
Sbjct: 62 YFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSR 111
>08_02_1494 + 27523016-27524040,27524971-27525118
Length = 390
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 600 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEXVELP-LRHLHCSRAIGV 755
CD + ++ E L V DD+ CR+ + + P LHC RA V
Sbjct: 9 CDVISLPEDQVFEMLTRVSLDDLAACRQVSTRWRRLTYEPAFAPLHCRRADAV 61
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 476 LTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRGS 583
+ + +V T GP+G + +GR RS+T+ + G+
Sbjct: 27 MAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 62
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 476 LTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRGS 583
+ + +V T GP+G + +GR RS+T+ + G+
Sbjct: 26 MAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,211,902
Number of Sequences: 37544
Number of extensions: 501697
Number of successful extensions: 1268
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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