Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30316.Seq
(663 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 79 9e-14
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 79 9e-14
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 78 2e-13
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 70 4e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 70 6e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 51 2e-05
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 49 9e-05
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 45 0.002
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 43 0.006
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 33 8.1
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 79.0 bits (186), Expect = 9e-14
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRTCHGEWQ 210
VTQLNRLAAHPPFASWRNS EARTDRPSQQLR+ +GEW+
Sbjct: 40 VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 79.0 bits (186), Expect = 9e-14
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRTCHGEWQ 210
VTQLNRLAAHPPFASWRNS EARTDRPSQQLR+ +GEW+
Sbjct: 22 VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRTCHGEWQ 210
VTQLNRLAAHPPFASWRNS EARTDRPSQQLR +GEW+
Sbjct: 82 VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/52 (75%), Positives = 39/52 (75%)
Frame = -1
Query: 663 APVSGALXGXGVWWXTRSVXATLASALAPXXCAFFPSXLATXAGFPRQALNR 508
AP SGAL GV TRSV ATLASALAP AFFPS LAT AGFPRQALNR
Sbjct: 3 APCSGALSAAGVV-VTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNR 53
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 69.7 bits (163), Expect = 6e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRT 192
VTQLNRLAAHPPFASWRNS EARTDRPSQQLR+
Sbjct: 36 VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 68
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRTCHGEW 207
+TQ +RL AHPPF SWR+ A+ DRPS Q +T +G W
Sbjct: 29 ITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +1
Query: 139 WRNSXEARTDRPSQQLRTCHGEWQIV 216
WRNS EARTDRPSQQLR+ +GEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 80 GKPWSLPNLIALQHIPLSPAGVIAK 154
GK +LPNLIALQHIPLSPAGVI++
Sbjct: 15 GKTLALPNLIALQHIPLSPAGVISE 39
Score = 39.5 bits (88), Expect = 0.071
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +1
Query: 61 FTTCVTGKTLVVTQLNRLAAHPPFASWRNSXEARTDRPSQQLRT 192
F VTGKTL + L L P + S EARTDRPSQQLR+
Sbjct: 9 FYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRS 52
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRTCHG 201
+T LNRL AHP FASWR+ AR + PS + R G
Sbjct: 28 ITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 42.3 bits (95), Expect = 0.010
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 94 VTQLNRLAAHPPFASWRNSXEARTDRPSQQLRTCHGEWQ 210
+T +NRL +H P WR++ AR PS + + GEWQ
Sbjct: 32 ITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 32.7 bits (71), Expect = 8.1
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 3 GARYPIRPIVSRIT 44
GARYPIRPIVSRIT
Sbjct: 262 GARYPIRPIVSRIT 275
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,418,401
Number of Sequences: 1657284
Number of extensions: 8462943
Number of successful extensions: 17505
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17503
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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