Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30316.Seq
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   3.9  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   5.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.0  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   9.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   9.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 125 PLSPAGVIAKRPAPIALPNSCA 190
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 131 SPAGVIAKRPAPIALPNSCA 190
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 131 SPAGVIAKRPAPIALPNSCA 190
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 388 TSKGXKPSIXAMAHYVNXHPNQVXWGRXAVKHXIGXL 498
           TSK  K     + +Y N    +V  G+   +H I  L
Sbjct: 79  TSKKDKDGYKVVCYYTNWSQYRVKIGKFTPEHIIPDL 115


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 376 TWTPTSKGXKPSIXAMAHYVNXHPN 450
           TW     G + ++  M  +VN  P+
Sbjct: 271 TWNVVFNGSRKNLDVMKSFVNFRPS 295


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 131 SPAGVIAKRPAPIALPNSCA 190
           +P G   K+  P AL N CA
Sbjct: 53  TPEGEELKKDIPDALQNECA 72


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 131 SPAGVIAKRPAPIALPNSCA 190
           +P G   K+  P AL N CA
Sbjct: 54  TPEGEELKKDIPEALQNGCA 73


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 131 SPAGVIAKRPAPIALPNSCA 190
           +P G   K+  P AL N CA
Sbjct: 54  TPEGEELKKDIPEALQNGCA 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,276
Number of Sequences: 336
Number of extensions: 1995
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)