Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30316.Seq
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p pro...    30   2.4  
AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7 ...    30   2.4  
AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA ...    30   2.4  

>AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 98  PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 193
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 98  PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 193
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 87  PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 118


>AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 98  PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 193
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,229,146
Number of Sequences: 53049
Number of extensions: 386948
Number of successful extensions: 755
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)