Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30315.Seq
(806 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 225 1e-57
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 129 9e-29
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 98 3e-19
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 97 6e-19
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 91 4e-17
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 90 5e-17
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 90 7e-17
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 89 1e-16
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 87 6e-16
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 86 1e-15
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 85 2e-15
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 84 5e-15
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 83 1e-14
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 81 2e-14
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 80 6e-14
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 78 2e-13
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 75 2e-12
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 75 2e-12
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 73 9e-12
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 72 1e-11
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 66 1e-09
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 63 7e-09
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 54 3e-06
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 53 7e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 47 5e-04
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 46 0.001
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 42 0.014
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.042
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.074
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 40 0.097
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.097
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 37 0.52
UniRef50_Q9VHM8 Cluster: CG8136-PB, isoform B; n=3; Drosophila m... 36 1.6
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 35 2.8
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 34 3.7
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 4.8
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 6.4
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 225 bits (549), Expect = 1e-57
Identities = 136/254 (53%), Positives = 154/254 (60%), Gaps = 4/254 (1%)
Frame = +1
Query: 49 STKKPRNYDLGNGVTAFLQIQDVPQEG*IQVHWXXXXXXXXXXXXXXXXXXXWR*EEWGN 228
STKKPRNYDLGNGV F + + ++ + + G
Sbjct: 25 STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGT 84
Query: 229 QNSTPQT*ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 408
+ + +SFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG
Sbjct: 85 RTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 144
Query: 409 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNV 588
ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTST+ + N + ++ V
Sbjct: 145 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI--SLGNFKLPKHFNDDYFKKNKKCV 202
Query: 589 QSNAKRVMTS--LPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARPDKKVLPRIPQG--GL 756
+ KR KK K QKTVD AVIKAIGARPDKKVL + GL
Sbjct: 203 KRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 262
Query: 757 RTPXPANIPHRLRF 798
R+ + PHRLRF
Sbjct: 263 RS---SQYPHRLRF 273
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 32 AALRKNLRKNPGTMIWATE*LRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGG 211
A +K K P +RFSKSKMFHKKAKYKFIG LTVVVKQIGG
Sbjct: 19 ALTKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGG 78
Query: 212 EKNGGTRTVPLKRRSPSTPLRRK 280
EKNGGTRTVPLKRR P + K
Sbjct: 79 EKNGGTRTVPLKRRKSFYPTQEK 101
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 129 bits (311), Expect = 9e-29
Identities = 75/179 (41%), Positives = 98/179 (54%)
Frame = +1
Query: 262 YPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTG 441
YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL+ +L SGLLLVTG
Sbjct: 88 YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTG 147
Query: 442 PFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSL 621
PFA NSCPLRR+ QRYVIGTS+K RR+++ + ++ + +
Sbjct: 148 PFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEADIFAA- 206
Query: 622 PQKKRNTFHLSSAKPIQKTVDXAVIKAIGARPDKKVLPRIPQGGLRTPXPANIPHRLRF 798
KK K QK VD A++K I A P+ K + Q + + PHR+RF
Sbjct: 207 --KKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQ-NMFALHSSQYPHRMRF 262
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +2
Query: 26 QVAALRKNLRKNPGTMIWATE*LRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQI 205
+VA K +K+P LR+SK++M+ ++A Y+ VK+I
Sbjct: 9 KVAKSAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKI 68
Query: 206 GGEKNGGTRTVPLKRRSPSTPLR 274
GG KNGG RTV LK+ S P +
Sbjct: 69 GGPKNGGERTVFLKKSKASYPTK 91
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 97.9 bits (233), Expect = 3e-19
Identities = 63/164 (38%), Positives = 92/164 (56%)
Frame = +1
Query: 307 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 486
FS HVR+IR +++ GTV ILLAG H GKRV+ + L SGLLLVTGPF +N PLRR+ Q
Sbjct: 80 FSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQC 139
Query: 487 YVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKP 666
YVI TST+ + + RR+ +++A ++ ++ + K+ T K
Sbjct: 140 YVIATSTRIDISKFDVPKHIDDEYFRRV-DLKESKTDAGKLFST--ETKKYTVS-DIRKE 195
Query: 667 IQKTVDXAVIKAIGARPDKKVLPRIPQGGLRTPXPANIPHRLRF 798
QK VD + AI + PD K+L + L + + PH++ F
Sbjct: 196 DQKLVDNQIRAAIKSHPDSKILHAYLR-SLFSLGKRDYPHKMIF 238
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 96.7 bits (230), Expect = 6e-19
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 FYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLL 432
+YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLL
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 433 VTGPFAFNSCPLRRIPQRYVIGTSTK 510
VTGP N PLRR Q++VI TSTK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTK 200
Score = 41.1 bits (92), Expect = 0.032
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 95 RFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK---RR 253
R+S+S M+ +KA KY L V K +GG+KNGGTR V L+ R
Sbjct: 56 RYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRY 115
Query: 254 SPSTPLRRKSVPH 292
P+ + RK + H
Sbjct: 116 YPTEDVPRKLLSH 128
Score = 40.3 bits (90), Expect = 0.056
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +3
Query: 507 QISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDSE 674
+I + N K+PKH D YF EG+ IF T+KEKY +EQRK D +
Sbjct: 200 KIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQK 251
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 90.6 bits (215), Expect = 4e-17
Identities = 67/159 (42%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Frame = +1
Query: 259 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 435
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 436 TGPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMT 615
TGPF N P+RR+ Q YVI TSTK + N + SR + + AK+
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEKFDDKYFSR------DKKQKAKKTEG 163
Query: 616 SL-PQKKRNTFHLSS-AKPIQKTVDXAVIKAIGARPDKK 726
L +K T +L K QK VD +IKAI A PD K
Sbjct: 164 ELFETEKEATKNLPEFKKEDQKVVDAELIKAIEAVPDLK 202
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 90.2 bits (214), Expect = 5e-17
Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Frame = +1
Query: 262 YPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 435
YPT++ + + +S +P S+ +R + GTV ILLAG H GKRVV + L +GLL V
Sbjct: 92 YPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQLKTGLLPV 151
Query: 436 TGPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMT 615
TGP+ N CPLRRI Q YVI TSTK + +R + + + +
Sbjct: 152 TGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYFKRNKGPKRGRKDEGEIFE 211
Query: 616 SLPQKKRNTFHLSSA--KPIQKTVDXAVIKAIGARPDKKVL 732
+ PQ+ H+ S K Q VD V++A+ A P+KK+L
Sbjct: 212 AKPQE-----HVVSEEHKKTQAEVDKQVLEAVKAHPEKKML 247
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = +2
Query: 98 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRSPSTP 268
FS+SKMFHK+ +K V VK++ GEKNGG R +PLK+ S P
Sbjct: 37 FSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPLKKERRSYP 93
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 89.8 bits (213), Expect = 7e-17
Identities = 55/132 (41%), Positives = 73/132 (55%)
Frame = +1
Query: 307 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 486
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 487 YVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKP 666
YVI T T+ N + S + R + + ++ ++K+ T K
Sbjct: 146 YVIATKTRI--KIKNIKIPSQLNDEFFRRQDLKTKKSVDKIFAE--EEKKYTVS-DDRKK 200
Query: 667 IQKTVDXAVIKA 702
+QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 89.0 bits (211), Expect = 1e-16
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Frame = +1
Query: 259 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 438
FYP + + +K+ +IR +L+ GT+ ILLAG + GKRVVL+ L SGLLLV+
Sbjct: 68 FYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILILLAGVNRGKRVVLLKALKSGLLLVS 127
Query: 439 GPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTS 618
GP N PLRR+ Q+ VI TST+ SN + + + R ++ + S
Sbjct: 128 GPLKVNRVPLRRVHQKLVIATSTRID--ISNVKVPEHINDTYFRRHKVKKEAKEGDIFAS 185
Query: 619 LPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARPDKKVLPRIPQG--GLRTPXPANIPHRL 792
P++ T K Q VD ++KAI A+PD +L + + GL+ IPHRL
Sbjct: 186 KPERYTPT---EQRKKDQAEVDVQLLKAIKAQPDAAMLVKYLRTIFGLKNNM---IPHRL 239
Query: 793 RF 798
+F
Sbjct: 240 KF 241
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 86.6 bits (205), Expect = 6e-16
Identities = 59/156 (37%), Positives = 80/156 (51%)
Frame = +1
Query: 259 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 438
FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L SGLLLVT
Sbjct: 64 FYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVT 121
Query: 439 GPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTS 618
GPF N PLRR+ Q YVIGTSTK + ++ ++ +
Sbjct: 122 GPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFG-KVAEKKKKKTEGEFFEAE 180
Query: 619 LPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARPDKK 726
+KK K QK VD A+IKAI A P+ K
Sbjct: 181 KEEKKEIP---QGKKDDQKAVDAALIKAIEAVPELK 213
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 85.8 bits (203), Expect = 1e-15
Identities = 60/169 (35%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Frame = +1
Query: 223 GNQNSTPQT*ES-FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVV 399
G + P ES +YPT++ +R R + ++R ++ GTV ILLAG H GKRVV
Sbjct: 62 GGKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVV 119
Query: 400 LVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSA 579
+ L SGLLLVTGPF N PLRRIPQ YVI TST + + S
Sbjct: 120 FLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYFKGEP 179
Query: 580 SNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARPDKK 726
+ + + +KK + ++ QK VD ++ I A P+ K
Sbjct: 180 KKKKRSEDMFEEAAEEKKPSEQRIAD----QKAVDDQILPKISAVPNMK 224
Score = 39.5 bits (88), Expect = 0.097
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 95 RFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRS---PST 265
R+S+S ++ K+A YK T K IGG+KNGG R VP++R S P+
Sbjct: 21 RYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPVQRESRYYPTE 79
Query: 266 PLRRK 280
+RR+
Sbjct: 80 DVRRR 84
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 85.0 bits (201), Expect = 2e-15
Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Frame = +1
Query: 298 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 477
GR ++ V ++R +LK G V ILL G + GKRVVL+ +L SGLLLVTGPF+FN PLRR+
Sbjct: 31 GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRV 89
Query: 478 PQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQ----KKRN-- 639
RYVI TST + +S+ + R S +S K T L + KK+N
Sbjct: 90 NSRYVIATSTNVYE-FPEYDGSSLKSSVERAVSDLTDESFGKTKETKLAEFKDRKKKNKN 148
Query: 640 --TFHLSSAKPIQKTVD-XAVIKAIGARPDKKVLPRI 741
+ + +K+ + A +KA+ ++ D ++P +
Sbjct: 149 KDSMFVDEPSVSEKSPELMAKLKALQSKVDDVLVPSL 185
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 83.8 bits (198), Expect = 5e-15
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Frame = +1
Query: 283 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 462
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 463 PLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIR-SASNVQSNAKRVMTSLPQKKRN 639
P+RR+ Y+I TSTK + ++ T + S ++ + M + K N
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK----FTDEYFKVDRSKLKKSKDAFMDQGEETKVN 135
Query: 640 TFHLSSAKPIQKTVDXAVIKAIGARP 717
K Q+ +D ++I +I + P
Sbjct: 136 RVVSEERKKTQQALDASIIPSIQSNP 161
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 82.6 bits (195), Expect = 1e-14
Identities = 63/159 (39%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
Frame = +1
Query: 328 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 504
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 505 TKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVD 684
K + + I + S Q K + S K T K I KTVD
Sbjct: 127 LKVNVSGVKIPE---HINDEYFKRKSTAQKTGKNIFAS--GKTEYTVSEQRKKDI-KTVD 180
Query: 685 XAVIKAIGARPDKKVLPRIPQGGLRTPXPAN-IPHRLRF 798
++ AI P+ K L G R N PH+++F
Sbjct: 181 APILAAIKKHPEHKFL--FGYLGTRFSLGKNQYPHKMQF 217
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 81.4 bits (192), Expect = 2e-14
Identities = 48/155 (30%), Positives = 74/155 (47%)
Frame = +1
Query: 253 ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLL 432
+ +YP ++ + + + H ++RP+L+ GT+ ILLAGR GKRV+L+ L G+LL
Sbjct: 31 QKWYPADDEPQPKKARK--TAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQGVLL 88
Query: 433 VTGPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVM 612
VTGPF N PLRR+ RYVI TS+ + + + Q +
Sbjct: 89 VTGPFKLNGVPLRRVNARYVIATSSTVDLNGVDQKTLEKVSQPEYFTREKAEQKKGEEAF 148
Query: 613 TSLPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARP 717
+K S+ QK +D A++ I P
Sbjct: 149 FKQGEKPEKKKVASARAADQKAIDQALLATIKKEP 183
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 80.2 bits (189), Expect = 6e-14
Identities = 49/126 (38%), Positives = 67/126 (53%)
Frame = +1
Query: 328 IRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTST 507
+R ++ GTV I+LAGR AGKRVV + L SGL+L+TGPF N PLRRI QRYVI TST
Sbjct: 87 LRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATST 146
Query: 508 KFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVDX 687
K ++ T I + + ++ S +K S QK+VD
Sbjct: 147 KIDVSSVKVAAT---INDAYFAAEKKSTTKSEGAFFSDEKKAEKKKIADSRVADQKSVDS 203
Query: 688 AVIKAI 705
A++ +
Sbjct: 204 AILAVL 209
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 78.2 bits (184), Expect = 2e-13
Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Frame = +1
Query: 280 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 459
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 460 CPLRRIPQRYVIGTSTKFH--SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKK 633
PL+R+ YVI TSTK +N N ++ R + AKR ++ Q+
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVNANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQT 157
Query: 634 RNTFHLSSAKPIQKTVDXAVIKAI 705
L + QK+VD A+I AI
Sbjct: 158 AEKTRLDGKRNTQKSVDAALITAI 181
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 75.4 bits (177), Expect = 2e-12
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +1
Query: 259 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 438
+YP +K + K + +RP++K GT+ ILLAG G RVV++ L SG LLVT
Sbjct: 46 WYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVILLAGVFRGSRVVVLKQLDSGQLLVT 104
Query: 439 GPFAFNSCPLRRIPQRYVIGTST 507
GP+A N PL R+ QRYVI TST
Sbjct: 105 GPYAVNRIPLTRVDQRYVIATST 127
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 75.4 bits (177), Expect = 2e-12
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +1
Query: 301 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 474
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 475 IPQRYVIGTSTK 510
+ RYVI TS K
Sbjct: 84 VNARYVIATSQK 95
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 72.9 bits (171), Expect = 9e-12
Identities = 50/153 (32%), Positives = 77/153 (50%)
Frame = +1
Query: 259 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 438
+YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L LL++
Sbjct: 9 WYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLIS 66
Query: 439 GPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTS 618
GPF N PLRR+ RYVI TSTK N + ++ ++ + K+
Sbjct: 67 GPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAK-----EKLTKKEKKEANL 121
Query: 619 LPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARP 717
P+++ + QK VD A+I I P
Sbjct: 122 FPEQQNKEIKAERVED-QKVVDKALIAEIKKTP 153
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +1
Query: 322 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 501
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I T
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVT 127
Query: 502 STKFHSATSNCQNTSMMITS-RRIRSASNVQS-NAKRVMTSLPQKKRNTFHLSSAKPIQK 675
ST + Q I S RI ++S + K+ L + K + ++ IQK
Sbjct: 128 STNIFDFNNLSQVKEKFIQSAERINDEIFIKSMDVKKRQKKLLKNKNESLFMNDV--IQK 185
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 65.7 bits (153), Expect = 1e-09
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 352 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTKFHSATSN 531
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T TK
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTK----VDI 68
Query: 532 CQ-NTSMMITSRRIRSASNVQSNAKR 606
C+ TS +T + S Q+ A R
Sbjct: 69 CKVKTSKHLTDASFKKQSAAQAQAPR 94
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 63.3 bits (147), Expect = 7e-09
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Frame = +1
Query: 328 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 504
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 505 TKFH-SATSNCQNTSMMI----TSRRIRSASNVQSNAKRVMTSLPQKK-----RNTFHLS 654
T S+ T+ + + +S + + ++ KK + T
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 655 SAKPIQKTVDXAVIKAIGARPDKKVLPRIPQGGLR---TPXPANIPHR 789
+ +QK +D A+I AI K + G LR T P + PHR
Sbjct: 149 ARAQLQKKIDAALIAAI----KKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +1
Query: 331 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTK 510
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 511 FHSATS 528
A +
Sbjct: 109 IEVAAN 114
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = +1
Query: 388 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTK 510
KRVV + L SGLLL+TG F N PLRR+ Q YVI TSTK
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTK 196
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 47.2 bits (107), Expect = 5e-04
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +1
Query: 274 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 453
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 454 NSCPLRRIPQRYVIGTST 507
N PL RI +RY++ TST
Sbjct: 65 NGIPLFRIDERYLLATST 82
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1
Query: 304 PFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQ 483
P KH + + N TV I++ G+H +RVV + L G LL+TGP A N L R Q
Sbjct: 123 PAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQ 179
Query: 484 RYVIGTSTKFHSAT 525
+ V+ TST ++ T
Sbjct: 180 KSVVITSTTINTQT 193
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 42.3 bits (95), Expect = 0.014
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +1
Query: 424 LLLVTGPFAFNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAK 603
L GPF+ N P+RRI Q++V+ TSTK + T +T + K
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPAT---MTDDYFKRTKYFGKEKK 66
Query: 604 RVMTSLPQKKRNTFHLSSAKPIQKTVDXAVIKAIGARPDKKVL 732
+ Q K+ + K QKT+D AV+ +I D K+L
Sbjct: 67 DI---FEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLL 106
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 334 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 492
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.074
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 331 RPNLKIGTVCILLAGRHAGKRVVLVGILP 417
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.5 bits (88), Expect = 0.097
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +1
Query: 232 NSTPQT*ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGI 411
++T + FYP + ++ + +K ++ +R ++ GTV I+LAGR VV +
Sbjct: 198 SNTEEKLPRFYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQ 250
Query: 412 LPSGLLLVTGPFAFNSCP 465
L SGLLL+TG F N P
Sbjct: 251 LSSGLLLITGSFKINDVP 268
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.097
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 334 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 477
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 340 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTK 510
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T K
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKK 61
>UniRef50_Q9VHM8 Cluster: CG8136-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG8136-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 441
Score = 35.5 bits (78), Expect = 1.6
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +1
Query: 451 FNSCPLRRIPQRYVIGTSTKFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK 630
+ P R + + V TK H+ + NCQ + + ++ SA+N Q + SLPQ
Sbjct: 39 YRRLPSRSLNRSQVTDVPTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQT 95
Query: 631 KRNTFHLSSA 660
RN+ H SSA
Sbjct: 96 TRNS-HQSSA 104
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 391 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTKFHS 519
+++++GI+P +L++ F F+S L IPQR +IGT+ S
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATITS 259
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 34.3 bits (75), Expect = 3.7
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 337 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVI--GTSTK 510
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ G S K
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 4.8
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 298 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 456
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 6.4
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 413 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 279
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,246,100
Number of Sequences: 1657284
Number of extensions: 16517351
Number of successful extensions: 44609
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 42760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44573
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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