Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30313.Seq
(799 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 100 4e-20
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 100 4e-20
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 100 4e-20
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 71 3e-11
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 70 8e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 66 7e-10
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 54 4e-06
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 44 0.003
UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.018
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.041
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.096
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.2
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 1.6
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 34 3.6
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 34 4.8
UniRef50_Q5CYC7 Cluster: Uncharacterized protein with predicted ... 33 6.3
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 33 8.3
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 100 bits (240), Expect = 4e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 1 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 135
AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 69 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 100 bits (240), Expect = 4e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 1 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 135
AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 23 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 100 bits (240), Expect = 4e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 1 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 135
AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 27 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 100 bits (240), Expect = 4e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 1 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 135
AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 9 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -2
Query: 495 LATFAGFPRQALNRGLPXGFRFSALRHLDPKKL 397
LATFAGFPRQALNRGLP GFRFSALRHLDPKKL
Sbjct: 40 LATFAGFPRQALNRGLPLGFRFSALRHLDPKKL 72
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 69.7 bits (163), Expect = 8e-11
Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = +2
Query: 2 PSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 154
PSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 7 PSFYNVVTGKTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 66.5 bits (155), Expect = 7e-10
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +1
Query: 7 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 129
+L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 18 ILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +1
Query: 7 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 135
VL R DW N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 52.8 bits (121), Expect = 1e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 1 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 123
A +L R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 19 ATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 7 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 129
++ RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 99
Score = 41.9 bits (94), Expect = 0.018
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 604 VRXHFFGEMCAEPLFVIF*IHSNMXPLHXTINPDKCFIILKKXEFXYFNIPCXLIP-FCG 780
VR HF G+ P IF H TI IILKK E+ Y PC FCG
Sbjct: 22 VRWHFSGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCG 81
Query: 781 IL 786
IL
Sbjct: 82 IL 83
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.041
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 85 WRNSEEARTDRPSQQLR 135
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.096
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -2
Query: 156 FAIRHSXAQLLGRAIGAGLFAITPAGERG 70
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 7 VLQRRDWENPGVTQLNRLAAHPP 75
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 1.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 19 RDWENPGVTQLNRLAAHPPFASWRNSEEA 105
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 34.3 bits (75), Expect = 3.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 7 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 114
+L +DW+NP + + + H P S+R +EAR D
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 16 RRDWENPGVTQLNRLAAHPPFASWRNSEEART 111
+ DWENP V Q+NRL A S+ E+A T
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALT 62
>UniRef50_Q5CYC7 Cluster: Uncharacterized protein with predicted
coiled coil regions; n=2; Cryptosporidium|Rep:
Uncharacterized protein with predicted coiled coil
regions - Cryptosporidium parvum Iowa II
Length = 825
Score = 33.5 bits (73), Expect = 6.3
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +1
Query: 244 SLINKRI--DRDRVECCSSLEQESTIKERGLQRQRAKNRL 357
SL N+ I +RD V C S+ Q+S IKER L+ ++ K +L
Sbjct: 119 SLSNQNIKSERDNVSKCLSIRQQSLIKERELRLEKTKLKL 158
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 1 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQ 126
A L+RR+ +NPG QLN L A P F +++A +R S+
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSK 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,692,789
Number of Sequences: 1657284
Number of extensions: 13938678
Number of successful extensions: 28949
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 28229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28943
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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