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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30311.Seq
         (907 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.81 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   4.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   7.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 39  AQRVPAPRAKVSAETALARGV*ERRSDDRR*GWRTXRVALSQ 164
           A+R PAP  + + + A ARG    R+D         R AL+Q
Sbjct: 273 AERAPAPAVRAAGDAAAARGA--ARADGAGGPLHDHRPALAQ 312



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
 Frame = -3

Query: 176 SNQTLR--QRNTXRAPSLAPVVTSPLS----DSAGKRSFG*DFCSRS 54
           +NQ +R  +R T +    +P  TS +S    DS+  R F  + C+RS
Sbjct: 97  TNQEIRGPKRKTWKVEEDSPSPTSSVSPEVKDSSRDRPFTCEVCNRS 143


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 503 GVSMHQQQLPIQSEPVQSR 447
           G +MHQQ  P Q  P+Q +
Sbjct: 195 GANMHQQGPPHQQPPIQQQ 213


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 503 GVSMHQQQLPIQSEPVQSR 447
           G +MHQQ  P Q  P+Q +
Sbjct: 197 GANMHQQGPPHQQPPIQQQ 215


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 246 PHLHLGQKPVEQIDGPDE 193
           P + +  KP ++IDG D+
Sbjct: 66  PEIDIEDKPAQKIDGEDD 83


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 298 SSMDMFMQETVMHGTD 251
           SS+D+ +QE V  GT+
Sbjct: 68  SSVDVLLQEAVFEGTN 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,655
Number of Sequences: 336
Number of extensions: 3915
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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