Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30311.Seq
(907 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p pro... 87 4e-17
AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-P... 87 4e-17
AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-P... 87 4e-17
AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-P... 87 4e-17
AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-P... 87 4e-17
AE014297-4769|AAN14276.1| 282|Drosophila melanogaster CG11525-P... 48 1e-05
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein. 30 5.0
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-... 29 6.6
>AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p
protein.
Length = 566
Score = 86.6 bits (205), Expect = 4e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 16 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGARXVLRCLKVWFDLPADVL 195
++ +LY TL EY +L+ K L LP ES EVT G RDG+ VLRCLK+W++LP+DVL
Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294
Query: 196 IGAINLFDRFLTKMKVRP 249
A++L DRFL +M V+P
Sbjct: 295 FSAMSLVDRFLDRMAVKP 312
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 270 VSCMNISIDEYAARTNIXRTVSIXELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVT 449
++CM+++ A + + + +LV+ISQ CTAGD+ RM+ VI +KLG+ G +T
Sbjct: 315 MACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPIT 374
Query: 450 A 452
+
Sbjct: 375 S 375
>AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-PD,
isoform D protein.
Length = 566
Score = 86.6 bits (205), Expect = 4e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 16 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGARXVLRCLKVWFDLPADVL 195
++ +LY TL EY +L+ K L LP ES EVT G RDG+ VLRCLK+W++LP+DVL
Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294
Query: 196 IGAINLFDRFLTKMKVRP 249
A++L DRFL +M V+P
Sbjct: 295 FSAMSLVDRFLDRMAVKP 312
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 270 VSCMNISIDEYAARTNIXRTVSIXELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVT 449
++CM+++ A + + + +LV+ISQ CTAGD+ RM+ VI +KLG+ G +T
Sbjct: 315 MACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPIT 374
Query: 450 A 452
+
Sbjct: 375 S 375
>AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-PC,
isoform C protein.
Length = 566
Score = 86.6 bits (205), Expect = 4e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 16 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGARXVLRCLKVWFDLPADVL 195
++ +LY TL EY +L+ K L LP ES EVT G RDG+ VLRCLK+W++LP+DVL
Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294
Query: 196 IGAINLFDRFLTKMKVRP 249
A++L DRFL +M V+P
Sbjct: 295 FSAMSLVDRFLDRMAVKP 312
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 270 VSCMNISIDEYAARTNIXRTVSIXELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVT 449
++CM+++ A + + + +LV+ISQ CTAGD+ RM+ VI +KLG+ G +T
Sbjct: 315 MACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPIT 374
Query: 450 A 452
+
Sbjct: 375 S 375
>AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-PB,
isoform B protein.
Length = 566
Score = 86.6 bits (205), Expect = 4e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 16 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGARXVLRCLKVWFDLPADVL 195
++ +LY TL EY +L+ K L LP ES EVT G RDG+ VLRCLK+W++LP+DVL
Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294
Query: 196 IGAINLFDRFLTKMKVRP 249
A++L DRFL +M V+P
Sbjct: 295 FSAMSLVDRFLDRMAVKP 312
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 270 VSCMNISIDEYAARTNIXRTVSIXELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVT 449
++CM+++ A + + + +LV+ISQ CTAGD+ RM+ VI +KLG+ G +T
Sbjct: 315 MACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPIT 374
Query: 450 A 452
+
Sbjct: 375 S 375
>AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-PA,
isoform A protein.
Length = 566
Score = 86.6 bits (205), Expect = 4e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 16 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGARXVLRCLKVWFDLPADVL 195
++ +LY TL EY +L+ K L LP ES EVT G RDG+ VLRCLK+W++LP+DVL
Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294
Query: 196 IGAINLFDRFLTKMKVRP 249
A++L DRFL +M V+P
Sbjct: 295 FSAMSLVDRFLDRMAVKP 312
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 270 VSCMNISIDEYAARTNIXRTVSIXELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVT 449
++CM+++ A + + + +LV+ISQ CTAGD+ RM+ VI +KLG+ G +T
Sbjct: 315 MACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPIT 374
Query: 450 A 452
+
Sbjct: 375 S 375
>AE014297-4769|AAN14276.1| 282|Drosophila melanogaster CG11525-PE,
isoform E protein.
Length = 282
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 270 VSCMNISIDEYAARTNIXRTVSIXELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVT 449
++CM+++ A + + + +LV+ISQ CTAGD+ RM+ VI +KLG+ G +T
Sbjct: 31 MACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLGVQMGHAPIT 90
Query: 450 A 452
+
Sbjct: 91 S 91
Score = 40.7 bits (91), Expect = 0.003
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 166 VWFDLPADVLIGAINLFDRFLTKMKVRP 249
+W++LP+DVL A++L DRFL +M V+P
Sbjct: 1 MWYELPSDVLFSAMSLVDRFLDRMAVKP 28
>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
Length = 1893
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 491 HQQQLPIQSEPVQSRHADSSSCQSQLVLND 402
HQQQLP+Q + Q + SS QS +ND
Sbjct: 1247 HQQQLPLQQQQQQQQQPLMSSSQSMQNVND 1276
>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
protein.
Length = 16223
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +3
Query: 138 RTXRVALSQSLVRSTRGRAHRGHQSVRQVSDQDEGE-AVSVPCITVSCMNISIDEYAART 314
RT +++ QS +T R G + Q + ++ E + S+P +T + S+ E +A
Sbjct: 8666 RTLSISVPQSF--ATTNRLLTGSSAEEQTAQEETSEHSKSLPQLTTEERS-SLQESSAEE 8722
Query: 315 NIXRTVSIXELVSISQSACTAGDVSRMSRVIQDK 416
N V L S+SQS+ ++ V +DK
Sbjct: 8723 NQMTEVPWTVLTSLSQSSSKTKNIFSSQSVNEDK 8756
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,806,840
Number of Sequences: 53049
Number of extensions: 845796
Number of successful extensions: 2242
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2237
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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